Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq126021 98.7 7e-16
>seq126021
Length=250
Score = 98.7 bits (108), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||||||||| || ||||| || || ||||| ||||||| | || || |||||| |
Sbjct 16 AATGCAAATTTTCGTCAAAACGCTCACGGGGAAGACTATTACACTAGAAGTTGAAAGCTC 75
Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
||| || ||||| |||||| || || ||||| |||||| |||| |||
Sbjct 76 TGACACAATCGACAAT--GTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCCCCGGAT 133
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|||||| |||| || ||||| || || || | || || | || | | ||||||||
Sbjct 134 CAGCAAAGGTTGATCTTTGCAGGCAAGCAGCTCGAAGATGGTCGTACACTAGCCGATTAC 193
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||| ||||| ||| |||| | || | || | ||| | ||||| ||
Sbjct 194 AACATTCAAAAGGAGTCCACTCTTCACCTTGTGCTCCGTCTTCGTGGTGG 243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354539106982824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |