Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq106406 333 8e-87 seq155589 327 4e-85 >seq106406 Length=233 Score = 333 bits (368), Expect = 8e-87 Identities = 213/232 (92%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 14659 CGACCTTCCTGCCGACATCGCCGGGCAGGCGGCACTGCACGGTATCTTCGATCCAGCCGT 14718 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 1 CGACCTTCCTGCCGACATCGCCGGGAAGGCGGCACTGAACGGTATCTTCGATCCAGCCGT 60 Query 14719 TGGCGTTGACGAAATCCACGTCAACACCGTCGTAGTCGTCCTCAGACGGAGCGCTGATGC 14778 |||| |||||||| || || || || ||||||||||||||||||||||| |||||||||| Sbjct 61 TGGCATTGACGAACTCAACATCGACGCCGTCGTAGTCGTCCTCAGACGGCGCGCTGATGC 120 Query 14779 TGATCCTCAGTGGACCATCCATGTTCTGCGGCGAGTACATGTGCCCGAATGTTGTCCTTG 14838 ||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| | Sbjct 121 TGATCTTCAGTACGCCATCCATGTTCTGCGGCGAGTACATGTGCCCGAACGTGGTCCTGG 180 Query 14839 GCTCGTCTCGGGCCGCAGAGATCACGCCGCGCTTGATGGTCTTCTCGGCATA 14890 |||||||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct 181 GCTCGTCTCGTGCCGCAGAGATCACGCCGCGCTTGATCGTCTTCTCCGCATA 232 >seq155589 Length=284 Score = 327 bits (362), Expect = 4e-85 Identities = 243/284 (86%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 38984 TGCGGTACTGATGATTACTCTGTCCGGCTGTGCCAGCAACGGGACACCAATCGATCAGGC 39043 |||||| ||| |||| || ||| ||||||| ||||||||||| || || || || ||||| Sbjct 1 TGCGGTGCTGTTGATCACACTGGCCGGCTGCGCCAGCAACGGAACGCCTATTGAACAGGC 60 Query 39044 GGACGTGCGACAGATCGTTCAGGGGCAGACCACCTACGACCAGATGCTGGAGAGATTCGG 39103 ||||| || |||||||||| || || ||||||||||||||||||||||| | ||||| Sbjct 61 CGACGTCCGCGAGATCGTTCAAGGTCAAACCACCTACGACCAGATGCTGGAACGGTTCGG 120 Query 39104 CAATCCGCTTTCCCAATCCTTCGACTCCGATGGAAATCTTCAGGCTATCTGGTTCTACGT 39163 ||||| |||||||||||||| |||||||| |||||||| ||||| |||||||||||||| Sbjct 121 GAATCCCCTTTCCCAATCCTTTGACTCCGAAGGAAATCTGCAGGCGATCTGGTTCTACGT 180 Query 39164 CTACGTCGGCCCCTTCGGGACCGGCATGGAGCAGCAGAGCCTGACTGTACTCTTCGACAA 39223 ||||||||| || || || || |||||||||||||||| ||| ||||| || |||||||| Sbjct 181 CTACGTCGGGCCTTTTGGCACTGGCATGGAGCAGCAGAACCTTACTGTCCTTTTCGACAA 240 Query 39224 GGACAACAAGGTCAAGCGGTACGTGATGACCAATGGTCAGCCCG 39267 ||| |||||||||||||| |||||||||||||| || | ||||| Sbjct 241 GGAAAACAAGGTCAAGCGATACGTGATGACCAACGGCCGGCCCG 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159882606032880