Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_030909.1
Length=50183
Score E
Sequences producing significant alignments: (Bits) Value
seq106406 333 8e-87
seq155589 327 4e-85
>seq106406
Length=233
Score = 333 bits (368), Expect = 8e-87
Identities = 213/232 (92%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 14659 CGACCTTCCTGCCGACATCGCCGGGCAGGCGGCACTGCACGGTATCTTCGATCCAGCCGT 14718
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1 CGACCTTCCTGCCGACATCGCCGGGAAGGCGGCACTGAACGGTATCTTCGATCCAGCCGT 60
Query 14719 TGGCGTTGACGAAATCCACGTCAACACCGTCGTAGTCGTCCTCAGACGGAGCGCTGATGC 14778
|||| |||||||| || || || || ||||||||||||||||||||||| ||||||||||
Sbjct 61 TGGCATTGACGAACTCAACATCGACGCCGTCGTAGTCGTCCTCAGACGGCGCGCTGATGC 120
Query 14779 TGATCCTCAGTGGACCATCCATGTTCTGCGGCGAGTACATGTGCCCGAATGTTGTCCTTG 14838
||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct 121 TGATCTTCAGTACGCCATCCATGTTCTGCGGCGAGTACATGTGCCCGAACGTGGTCCTGG 180
Query 14839 GCTCGTCTCGGGCCGCAGAGATCACGCCGCGCTTGATGGTCTTCTCGGCATA 14890
|||||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 181 GCTCGTCTCGTGCCGCAGAGATCACGCCGCGCTTGATCGTCTTCTCCGCATA 232
>seq155589
Length=284
Score = 327 bits (362), Expect = 4e-85
Identities = 243/284 (86%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 38984 TGCGGTACTGATGATTACTCTGTCCGGCTGTGCCAGCAACGGGACACCAATCGATCAGGC 39043
|||||| ||| |||| || ||| ||||||| ||||||||||| || || || || |||||
Sbjct 1 TGCGGTGCTGTTGATCACACTGGCCGGCTGCGCCAGCAACGGAACGCCTATTGAACAGGC 60
Query 39044 GGACGTGCGACAGATCGTTCAGGGGCAGACCACCTACGACCAGATGCTGGAGAGATTCGG 39103
||||| || |||||||||| || || ||||||||||||||||||||||| | |||||
Sbjct 61 CGACGTCCGCGAGATCGTTCAAGGTCAAACCACCTACGACCAGATGCTGGAACGGTTCGG 120
Query 39104 CAATCCGCTTTCCCAATCCTTCGACTCCGATGGAAATCTTCAGGCTATCTGGTTCTACGT 39163
||||| |||||||||||||| |||||||| |||||||| ||||| ||||||||||||||
Sbjct 121 GAATCCCCTTTCCCAATCCTTTGACTCCGAAGGAAATCTGCAGGCGATCTGGTTCTACGT 180
Query 39164 CTACGTCGGCCCCTTCGGGACCGGCATGGAGCAGCAGAGCCTGACTGTACTCTTCGACAA 39223
||||||||| || || || || |||||||||||||||| ||| ||||| || ||||||||
Sbjct 181 CTACGTCGGGCCTTTTGGCACTGGCATGGAGCAGCAGAACCTTACTGTCCTTTTCGACAA 240
Query 39224 GGACAACAAGGTCAAGCGGTACGTGATGACCAATGGTCAGCCCG 39267
||| |||||||||||||| |||||||||||||| || | |||||
Sbjct 241 GGAAAACAAGGTCAAGCGATACGTGATGACCAACGGCCGGCCCG 284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159882606032880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |