Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq106406 338 2e-88 >seq106406 Length=233 Score = 338 bits (374), Expect = 2e-88 Identities = 214/232 (92%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 24745 TATGCGGAGAAGACCATTAAGCGCGGCGTGATCTCCGCAGCCCGAGACGAACCAAGGACC 24804 |||||||||||||| || ||||||||||||||||| || || |||||||| || |||||| Sbjct 232 TATGCGGAGAAGACGATCAAGCGCGGCGTGATCTCTGCGGCACGAGACGAGCCCAGGACC 173 Query 24805 ACATTCGGGCACATGTACTCGCCGCAGAACATGGATGGTCCGCTGAGGATCAGCATCAGC 24864 || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 172 ACGTTCGGGCACATGTACTCGCCGCAGAACATGGATGGCGTACTGAAGATCAGCATCAGC 113 Query 24865 GCGCCGTCTGAGGACGACTACGACGGCGTCGATGTAGAGTTCGTCAATGCCAACGGCTGG 24924 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 112 GCGCCGTCTGAGGACGACTACGACGGCGTCGATGTTGAGTTCGTCAATGCCAACGGCTGG 53 Query 24925 ATCGAAGATACCGTCCAGTGCCGACTGCCCGGCGATGTTGGCAGGAAGGTCG 24976 |||||||||||||| |||||||| || ||||||||||| ||||||||||||| Sbjct 52 ATCGAAGATACCGTTCAGTGCCGCCTTCCCGGCGATGTCGGCAGGAAGGTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156215939427280