Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq218924 123 4e-23
>seq218924
Length=406
Score = 123 bits (136), Expect = 4e-23
Identities = 173/240 (72%), Gaps = 6/240 (3%)
Strand=Plus/Plus
Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686
||||| ||||||||||||||||| ||||||||||| ||| || || || || || ||
Sbjct 95 AAACAAGCAAAATCACAATGAAGCCCTTCATCTCTTGAAATCAACTCATTTGAGAACGTT 154
Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAG 46746
| ||||||||||| ||||| ||||| | ||| || |||| |||| || || |||
Sbjct 155 AATCCAGGCATTAGCCCACGTTTTTTTAACCAGAAAATAGAGCAGAAACTACCTGAGAAG 214
Query 46747 AATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATC---ATTA 46803
|| || || || ||| ||||| || | || | ||| || ||| | || | |
Sbjct 215 AAAATTCCCTCAACACAAGCGAACGCCAAAATCCGCTCAGCG-AAC--GATTCTGTACTG 271
Query 46804 TGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCA 46863
| ||||||| | |||||||||||||||||||| || || || | ||||| ||||||
Sbjct 272 TCAATCCACTTCAACGCCCAATCAGCCTTTTTCTTGACGCAGGGGACAGTTTCAATAGCA 331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 710215339491840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |