Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_031241.1 Length=43293 Score E Sequences producing significant alignments: (Bits) Value seq11608 95.1 3e-15 >seq11608 Length=226 Score = 95.1 bits (104), Expect = 3e-15 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 38047 AAAACAGTGCTAGACGCTGCTAATGACCACTTATGGAAAGATGATAACCAAATTGCACAC 38106 ||||| ||| |||| || || || || ||| |||||||||| ||||| ||||| | | Sbjct 3 AAAACTGTGTTAGATGCAGCGAACGATCACCTATGGAAAGACGATAATCAAATCGTTGAA 62 Query 38107 ATTGAAAGTTTTAAGCAATATGCAGAAGAGCCAAAAATAATCATGAATGTAGAGGAAGTG 38166 || | |||||||||||||||||||| || |||||||| || | | || ||||||||| Sbjct 63 ATACACAGTTTTAAGCAATATGCAGAGGAACCAAAAATTATTTTAGAAGTGGAGGAAGTG 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137914490456720