Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq21568 165 2e-35 seq126021 152 1e-31 seq44495 152 1e-31 seq48980 149 1e-30 seq281664 134 3e-26 seq279770 123 6e-23 seq280556 122 2e-22 seq281289 102 2e-16 seq124980 87.8 4e-12 >seq21568 Length=652 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || || | ||| ||||| || || ||||||||||||||||| |||| |||||| Sbjct 320 AGTCGAAGCACCAAATGCAGAGTTGATTCCTTTTGGATGTTGTAATCTGCTAGAGTTCTG 379 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| |||||||||||||| | | |||||| || Sbjct 380 CCATCTTCCAGTTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATTCCCTCT 439 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || |||||||| ||| || ||| | || | | |||| ||||| |||||||| | ||| Sbjct 440 TTGTCTTGAATCTTTGTCTTCACATTGTCGATGGTGTCGGAACTTTCTACTTCCAAAGTG 499 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| || | ||||||||||| | ||||||| Sbjct 500 ATGGTCTTGCCAGTCAATGTCTTCACGAAAATCTGCATT 538 >seq126021 Length=250 Score = 152 bits (168), Expect = 1e-31 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| |||||||| ||||| ||||| |||||||||||||||| || | ||||| Sbjct 229 GAGCACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGCTAGTGTACGACCATC 170 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || || || ||||| | ||| ||||| |||| | || |||||||| || Sbjct 169 TTCGAGCTGCTTGCCTGCAAAGATCAACCTTTGCTGATCCGGGGGAATACCTTCCTTGTC 110 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || ||||||| | || | |||| || || || ||||| || |||||||| Sbjct 109 TTGAATCTTAGCTTTGACATTGTCGATTGTGTCAGAGCTTTCAACTTCTAGTGTAATAGT 50 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || |||||||| || || ||||| | |||||| Sbjct 49 CTTCCCCGTGAGCGTTTTGACGAAAATTTGCATT 16 >seq44495 Length=1402 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || |||||||| ||||| || || ||||||||||| || | ||| || ||||| Sbjct 707 AGGACGAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCTTCCATCC 766 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||| |||||||| ||||||||||| |||| | ||| |||||||| || Sbjct 767 TCAAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCC 826 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||| ||| | || | |||| || ||||| || || || || || || Sbjct 827 TGAATTTTAGCTTTCACATTATCGATCGTGTCAGAGCTCTCCACCTCCAGGGTGATGGTC 886 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||||||||||||| |||||| Sbjct 887 TTTCCGGTCAAGGTCTTCACGAAGATCTGCAT 918 Score = 132 bits (146), Expect = 1e-25 Identities = 165/224 (74%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | || || | || || || ||||| || |||||||| || || || ||||| Sbjct 925 CCTGAGACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGGATGTTATAGTCAGCCAAAGT 984 Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000 || |||||||| || ||||| || |||||||| |||||||||||||| | | |||| Sbjct 985 CCTACCATCTTCCAGCTGCTTT--CCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGGATT 1042 Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060 || ||||| ||||| || || ||||| | || | | |||| |||||||| || || Sbjct 1043 CCCTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAACTCTCAACCTCT 1102 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || ||||| || | ||||| ||||| | |||||| Sbjct 1103 AAGGTGATGGTCTTGCCGGTCAACGTCTTGACGAAAATCTGCAT 1146 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||| |||||||| ||||| || |||||||| |||||||| | || | ||||| ||| Sbjct 1166 ACAAGGTGAAGAGTCGACTCCTTCTGGATGTTATAATCGGCAAGGGTACGACCATCCTCT 1225 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||||||||||||||||| || |||||||| | | || || ||||| || || Sbjct 1226 AGTTGCTTCCCGGCGAAGATAAGTCTTTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGG 1285 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || ||| || || | || | | | || || || || || || || || ||||| Sbjct 1286 ATCTTTGCCTTAACGTTATCGATGGTATCAGAGGATTCAACCTCGAGGGTGATGGTTTTA 1345 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||| | ||||| Sbjct 1346 CCTGTCAGGGTCTTTACGAAAATTTGCAT 1374 >seq48980 Length=3483 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| || | ||||||||| || || ||||| || ||||||||||| ||||| | |||| Sbjct 1042 GAGCCTTAAGACAAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGTGTTCG 983 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || | || |||||||| || || | ||||||||||| || ||||| || Sbjct 982 ACCATCCTCCATCTGCTTACCGGCGAAAATGAGACGCTGCTGGTCCGGCGGTATTCCCTC 923 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| ||| |||||| | || | | | || |||||||| || || ||||| Sbjct 922 CTTATCCTGAATCTTTGCCTTGACATTATCGATGGTATCAGAACTCTCGACCTCGAGAGT 863 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || || |||||||||| |||||| || Sbjct 862 TATGGTCTTCCCGGTAAGCGTTTTCACGAAGATCTGCATATT 821 >seq281664 Length=792 Score = 134 bits (148), Expect = 3e-26 Identities = 164/222 (74%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| ||||| |||||||| || || ||||||||||| || | || || Sbjct 102 GAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCT 161 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||||| || ||||| || || ||||| | || ||||||||| | | |||||| Sbjct 162 TCCATCTTCCAGCTGCTTT--CCAGCAAAGATCAACCGCTGCTGGTCTGGAGGAATTCCT 219 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || |||||| || ||| | || | | || |||||||| || || | Sbjct 220 TCCTTGTCCTGGATTTTTGCCTTAACATTGTCGATTGTATCAGAACTCTCCACCTCCAAG 279 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || || || ||||| || |||| ||||||| Sbjct 280 GTGATGGTCTTCCCTGTCAGGGTCTTGACAAAGATCTGCATT 321 Score = 113 bits (124), Expect = 1e-19 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| ||||||||||| || ||||||||||| || || | ||||| || || || Sbjct 567 GACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTTCGGCCGTCCTC 626 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||| || |||||||| || ||||| ||||| | | ||| |||||||| || || Sbjct 627 CAACTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGGGGGATACCTTCCTTGTCCTG 686 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || || || | || | |||||||| ||| || || | || || || || Sbjct 687 AATCTTGGCCTTCACGTTGTCAATTGTGTCTGAAGACTCAACCTCCAAGGTGATGGTCTT 746 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || || || | ||||| Sbjct 747 TCCGGTGAGAGTTTTGACAAAAATTTGCAT 776 >seq279770 Length=767 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| || || | ||| || ||||| || || ||||| ||||||||||| | |||| Sbjct 399 AGTCTAAGCACCAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGG 340 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || || || || || || || |||||||||||||| ||||| | | || || || Sbjct 339 CCGTCCTCAAGTTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCT 280 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || |||||||| ||| || ||| | || | ||||||| || || || || || || Sbjct 279 TTATCTTGAATCTTTGCCTTTACATTGTCAATTGTGTCTGAGCTTTCCACCTCGAGGGTG 220 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| || || ||||||| ||||| Sbjct 219 ATTGTTTTGCCAGTGAGGGTTTTTACGAAGATTTGCAT 182 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || ||||| || || || || ||||| ||||| | ||||| || || Sbjct 621 AGAACCAAATGCAGGGTAGATTCCTTCTGAATATTGTAGTCGGCGAGAGTTCGACCGTCC 562 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || || || || ||||| || || | | ||| || ||||| ||| Sbjct 561 TCAAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGATCAGGTGGGATACCCTCCTTGTCT 502 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| |||||| | || | | || ||||| || || ||||||||||| ||| Sbjct 501 TGGATTTTAGCCTTGACATTGTCAATTGTATCAGAACTTTCCACCTCAAGAGTAATGGTT 442 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || |||||||| || | ||||| Sbjct 441 TTGCCAGTAAGGGTCTTCACAAATATTTGCAT 410 >seq280556 Length=777 Score = 122 bits (134), Expect = 2e-22 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || ||||| ||||| |||||||||||||| || |||||||| | Sbjct 555 CAAG-TGAAGTGTCGATTCCTTTTGAATGTTATAATCGGCTAAAGTCCTGCCATCTTCCA 613 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||||| ||||| || | ||| || ||||| | | ||| ||||| || ||||| | Sbjct 614 ATTGCTTCCCAGCGAAAATTAACCTTTGTTGGTCTGGTGGGATCCCTTCTTTATCTTGGA 673 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| || | || | | ||||||||||| ||||| | ||| || ||||| | Sbjct 674 TCTTAGCTTTAACGTTATCAATAGTATCTGAACTCTCAACTTCCAAAGTGATTGTTTTTC 733 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | |||||||| || | |||||| Sbjct 734 CTGTTAAGGTCTTCACAAAAATTTGCATT 762 >seq281289 Length=787 Score = 102 bits (112), Expect = 2e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | || || || || || || ||||| || || ||||| | ||||| Sbjct 766 GAGCACCAAATGCAATGTTGATTCCTTCTGAATATTGTAGTCCGCCAAAGTGCGGCCATC 707 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| || ||||| || || ||||||||||| | | |||||| || || || Sbjct 706 TTCAAGTTGTTTACCAGCGAAAATTAGTCTCTGCTGGTCAGGGGGGATTCCCTCTTTATC 647 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || ||| | || | | | || || || || || || | || || || Sbjct 646 TTGGATCTTAGCCTTCACATTATCGATGGTATCAGAGCTTTCCACCTCTAAGGTGATGGT 587 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| || ||||| || |||||||||| |||||| Sbjct 586 TTTACCAGTGAGGGTTTTCACGAAGATTTGCATT 553 >seq124980 Length=249 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || |||||||| || ||||| ||||||||||| ||||| | ||||| ||||| Sbjct 144 AGGACGAGGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCC 85 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| | | ||||| |||| | ||||||||||| || Sbjct 84 TCAAGTTGCTTGCCGGCAAAGATCAATCGTTGCTGATCCGGGGGAATTCCTTCCTTATCC 25 Query 152013 TGAATTTT 152020 || || || Sbjct 24 TGGATCTT 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1149310228922152