Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq11600 98.7 8e-16 >seq11600 Length=84080 Score = 98.7 bits (108), Expect = 8e-16 Identities = 133/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 18930 CGAATGATTATA---TCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCA 18986 |||| ||||||| ||| ||||||||||| ||| | | |||| ||| |||||| Sbjct 22260 CGAAGGATTATAATGTCGGCTTGGAATCCACCTGATCTTAAGCTGATGGCACTTCCTCCA 22201 Query 18987 TGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAG 19046 || || | ||| ||||| || |||||||| |||||| | || || ||| | || || Sbjct 22200 TGCCATATGTTTGCACAGTTCTATGTTGCAAATGGTGAACTTTCATGTCAAATGTATCAA 22141 Query 19047 AGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACC 19106 | || | |||||||| ||||| || ||||| |||||||| ||| | |||||||| Sbjct 22140 CGCTCAGCCGATATGGGTCTTGGTGTGCCGTTTAACATTGCCTCATACTCTCTTCTTACA 22081 Query 19107 TACAT 19111 | ||| Sbjct 22080 TGCAT 22076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399446960192175