Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq9990 118 1e-21 seq8641 118 1e-21 seq8798 111 2e-19 seq10330 109 6e-19 seq8848 100 3e-16 seq8379 100 3e-16 seq8726 96.9 4e-15 seq11021 91.5 2e-13 >seq9990 Length=160576 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | |||||| ||||| || | || |||||| |||||||||||||||||| Sbjct 158968 CCTCCACGAAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGCC 159027 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || |||||||| |||||||| ||||| ||||||||||| | || Sbjct 159028 AAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 159087 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || ||||| || ||| || ||| | ||| | | | ||||| |||| || Sbjct 159088 ATGCCTTCCTTATCTTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCGGAGCTC---TC 159143 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||| || ||||| || || || | ||||| || ||||||||||| Sbjct 159144 CACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 159194 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || |||||||||||||||| ||| || |||| ||||||||||| || ||||| Sbjct 159916 TCCTTCTGGATATTGTAATCAGCCAAAGTACGACCGTCCTCTAGCTGCTTTCCGGCGAAG 159975 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | |||||| || | || | | ||||| ||| || |||| | | | ||| Sbjct 159976 ATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCC-TGGATTTTGGCCTTAACGTT 160034 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| ||| |||||| |||| |||||||| || || || || ||||| Sbjct 160035 GTCGATGGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTT 160091 Query 43169 TACAAAGATTTGCAT 43183 ||| ||||| ||||| Sbjct 160092 TACGAAGATCTGCAT 160106 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||||| ||| || | || || |||||||| |||||||| Sbjct 158547 CTCCTTCTGTATGTTGTAGTCAGCCAAAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAA 158606 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | ||| |||||| ||| || || | | Sbjct 158607 GATGAGACGCTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGGATCTTGGCCTTCACATT 158666 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| |||| ||||| || | |||||||| || || || || ||||| Sbjct 158667 GTCAATCGTGTCAGAGCTC---TCCACCTCCAGTGTGATGGTCTTCCCGGTCAGTGTCTT 158723 Query 43169 TACAAAGATTTGCAT 43183 ||||| || ||||| Sbjct 158724 CACAAAAATCTGCAT 158738 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | |||||| ||||| || | || |||||| |||||||||||||| ||| Sbjct 159196 CCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATATTGTAATCGGCC 159255 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || |||||||| || || || || | || ||||||||| | || Sbjct 159256 AAGGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCCGGTGGA 159315 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||| ||||| |||||| || | ||| | | | ||||| |||| || Sbjct 159316 ATACCCTCTTTGTCTTGGATTTTGGCCTTCA-CGTTGTCAATGGTGTCGGAGCTC---TC 159371 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||| ||| ||||| || || || | ||||| || ||||||||||| Sbjct 159372 CACCTCGAGCGTAATGGTCTTACCAGTCAAAGTCTTCACGAAGATTTGCAT 159422 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | |||||| ||||| || | || |||||||||||||||||| |||||| Sbjct 159424 CCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTTTGAATATTGTAGTCAGCC 159483 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| |||| || || ||||| || ||||| || | | ||||||||| | || Sbjct 159484 AAAGTCCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGG 159543 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | |||||| | | || |||| | | | ||| | | | ||||| |||| || Sbjct 159544 ATACCCTCCTTAT-CTTGGATTTTCGCCTTAACGTTGTCGATGGTGTCAGAGCTC---TC 159599 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| || || || | || || || || |||||||| Sbjct 159600 TACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 159650 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||||| ||| ||| |||| ||||||||||| || ||||| Sbjct 159687 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGCCCGTCCTCTAGCTGCTTTCCGGCGAA 159746 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | |||||| || | || | | |||||| ||| || |||| | | | ||| Sbjct 159747 GATTAGCCTCTGCTGATCCGGAGGAATACCCTCCTTATCC-TGGATTTTGGCCTTAACGT 159805 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | || || || || || || || |||| Sbjct 159806 TGTCGATGGTGTCAGAGCTC---TCCACCTCAAGAGTAATTGTCTTTCCGGTGAGAGTCT 159862 Query 43168 TTACAAAGATTTGCAT 43183 | || || |||||||| Sbjct 159863 TGACGAAAATTTGCAT 159878 >seq8641 Length=178042 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | |||||| ||||| || | || |||||| |||||||||||||||||| Sbjct 1609 CCTCCACGAAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGCC 1550 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || |||||||| |||||||| ||||| ||||||||||| | || Sbjct 1549 AAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 1490 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || ||||| || ||| || ||| | ||| | | | ||||| |||| || Sbjct 1489 ATGCCTTCCTTATCTTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCGGAGCTC---TC 1434 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||| || ||||| || || || | ||||| || ||||||||||| Sbjct 1433 CACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 1383 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || |||||||||||||||| ||| || |||| ||||||||||| || ||||| Sbjct 661 TCCTTCTGGATATTGTAATCAGCCAAAGTACGACCGTCCTCTAGCTGCTTTCCGGCGAAG 602 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || | |||||| || | || | | ||||| ||| || |||| | | | ||| Sbjct 601 ATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCC-TGGATTTTGGCCTTAACGTT 543 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| ||| |||||| |||| |||||||| || || || || ||||| Sbjct 542 GTCGATGGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTT 486 Query 43169 TACAAAGATTTGCAT 43183 ||| ||||| ||||| Sbjct 485 TACGAAGATCTGCAT 471 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | |||||| ||||| || | || |||||| |||||||||||||| ||| Sbjct 1381 CCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATATTGTAATCGGCC 1322 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || |||||||| || || || || | || ||||||||| | || Sbjct 1321 AAGGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCCGGTGGA 1262 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||| ||||| |||||| || | ||| | | | ||||| |||| || Sbjct 1261 ATACCCTCTTTGTCTTGGATTTTGGCCTTCA-CGTTGTCAATGGTGTCGGAGCTC---TC 1206 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||| ||| ||||| || || || | ||||| || ||||||||||| Sbjct 1205 CACCTCGAGCGTAATGGTCTTACCAGTCAAAGTCTTCACGAAGATTTGCAT 1155 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||||| ||| || | || || |||||||| |||||||| Sbjct 2030 CTCCTTCTGTATGTTGTAGTCAGCCAAAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAA 1971 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | ||| |||||| ||| || || | | Sbjct 1970 GATGAGACGCTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGGATCTTGGCCTTCACATT 1911 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| |||| ||||| || | |||||||| || || || || ||||| Sbjct 1910 GTCAATCGTGTCAGAGCTC---TCCACCTCCAGTGTGATGGTCTTCCCGGTCAGTGTCTT 1854 Query 43169 TACAAAGATTTGCAT 43183 ||||| || ||||| Sbjct 1853 CACAAAAATCTGCAT 1839 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||||| ||| ||| |||| ||||||||||| || ||||| Sbjct 890 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGCCCGTCCTCTAGCTGCTTTCCGGCGAA 831 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | |||||| || | || | | |||||| ||| || |||| | | | ||| Sbjct 830 GATTAGCCTCTGCTGATCCGGAGGAATACCCTCCTTATCC-TGGATTTTGGCCTTAACGT 772 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| || | || || || || || || || |||| Sbjct 771 TGTCGATGGTGTCAGAGCTC---TCCACCTCAAGAGTAATTGTCTTTCCGGTGAGAGTCT 715 Query 43168 TTACAAAGATTTGCAT 43183 | || || |||||||| Sbjct 714 TGACGAAAATTTGCAT 699 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | |||||| ||||| || | || |||||||||||||||||| |||||| Sbjct 1153 CCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTTTGAATATTGTAGTCAGCC 1094 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| |||| || || ||||| || ||||| || | | ||||||||| | || Sbjct 1093 AAAGTCCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGG 1034 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | |||||| | | || |||| | | | ||| | | | ||||| |||| || Sbjct 1033 ATACCCTCCTTAT-CTTGGATTTTCGCCTTAACGTTGTCGATGGTGTCAGAGCTC---TC 978 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| || || || | || || || || |||||||| Sbjct 977 TACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 927 >seq8798 Length=192640 Score = 111 bits (122), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| ||| || || || ||||| ||||| || || | | Sbjct 21084 ACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGCGAGTGTTCTTCC 21025 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||||||||||||| ||||| || || | |||||| |||| || | | ||||| Sbjct 21024 ATCTTCTAGCTGCTTACCGGCGAAGATAAGCCTCTGCTGATCGGGAGGGATACCTTCCTT 20965 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| |||||| |||| ||| | | | ||||| |||| || || || | | Sbjct 20964 GTCCTGGATTTTAGCCTTGA-CGTTGTCAATAGTGTCAGAGCTC---TCAACTTCCAAAG 20909 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||||||| || || ||||| |||||||| ||||| Sbjct 20908 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 20869 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | || ||||| | ||| |||||||||||| ||||| ||||| Sbjct 21551 CCACCTCTGAGACGAAGTACTAAATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCG 21492 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | | | || |||||||||||||| || || || || | ||||||||| | || Sbjct 21491 AGTGTTCTCCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 21432 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| || |||| ||| | | | ||||| |||| || Sbjct 21431 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCAGAGCTC---TC 21376 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| |||||||| || || ||||| ||||| || ||||| Sbjct 21375 AACTTCCAAAGTGATTGTTTTGCCGGTAAGGGTCTTGACAAAAATCTGCAT 21325 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||||||| || | ||||| || | || ||||| || || || ||||||||| Sbjct 21323 CCACCTCTTAATCGTAGAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTATAATCAGCC 21264 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | |||||| | || ||||||||||||||||| || || || | ||||||||| | || Sbjct 21263 AAAGTCCGACCATCCTCTAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 21204 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| | || | ||||| | | | ||||| |||| || Sbjct 21203 ATCCCTTCCTTGTCC-TGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---TC 21148 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || || ||||| || || || ||||| |||||||| ||||| Sbjct 21147 AACCTCCAAAGTAATAGTTTTTCCAGTAAGGGTCTTAACAAAGATCTGCAT 21097 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||||||| || | ||||| |||| || || || |||||||||||||||||| Sbjct 20867 CCACCTCTTAATCGAAGAACCAAGTGCAGGGTTGATTCTTTCTGAATATTGTAATCAGCC 20808 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || ||||| ||||||||||| || | || |||||||| | || Sbjct 20807 AAGGTACGGCCATCTTCAAGCTGTTTACCAGCGAAGATTAATCTTTGCTGGTCTGGAGGA 20748 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || ||||| | | ||| | |||| | | | | | | | || || |||| || Sbjct 20747 ATGCCTTCCTTAT-CTTGAATCTTTGCCTTAACATTGTCGATGGTATCAGAGCTC---TC 20692 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| |||||||| ||||| || || || || || || |||||||| Sbjct 20691 GACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 20641 Score = 93.3 bits (102), Expect = 5e-14 Identities = 142/196 (72%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||||||||||| ||||| | || |||||||| || |||||||| Sbjct 21743 TCCTTCTGGATGTTGTAATCAGCCAATGTCCGACCATCCTCTAGCTGTTTCCCAGCGAAG 21684 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||||| ||| ||||| | || | | ||||||||| ||| | || | |||| ||| Sbjct 21683 ATGAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCC-TGAATCTTAGCCTTGA-CGT 21626 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | || || || ||||| || | |||| Sbjct 21625 TGTCAATAGTGTCCGAGCTC---TCAACCTCTAAGGTTATTGTCTTGCCTGTCAAAGTCT 21569 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| |||||||| Sbjct 21568 TGACAAATATTTGCAT 21553 >seq10330 Length=49715 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||| ||||| || || || | || || |||||||| |||||||| Sbjct 15267 CTCCTTTTGAATGTTGTAGTCAGCAAGTGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 15326 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||| ||| || |||| ||| Sbjct 15327 GATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 15385 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | |||||||| ||||| || || |||| Sbjct 15386 TGTCAATGGTGTCAGAGCTC---TCTACCTCCAATGTGATGGTCTTGCCGGTCAGTGTCT 15442 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 15443 TCACAAAGATCTGCAT 15458 Score = 82.4 bits (90), Expect = 9e-11 Identities = 152/219 (69%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 || |||||||| || | || ||| || || || || || ||||| | || || | Sbjct 15472 CGTAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTATAGTCAGCTAATGTGCGACCA 15531 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| |||||||| ||||| ||||||||||| | || | | ||||| Sbjct 15532 TCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCTTCCTTA 15591 Query 43089 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 ||| ||| || ||| | ||| | | | ||||| |||| ||||| || | || Sbjct 15592 TCCTGGATCTTGGCTTTCA-CGTTGTCAATGGTGTCAGAGCTC---TCCACCTCAAGGGT 15647 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || || | ||||| ||||| |||||||| Sbjct 15648 AATGGTCTTACCAGTCAAGGTCTTGACAAATATTTGCAT 15686 >seq8848 Length=112532 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||| ||||| || | || || ||||| || || |||||| Sbjct 94567 TCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCGAGCTGTTTCCCGGCGAAT 94508 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | |||||||||||| | || | | |||||||| ||| || ||||| | Sbjct 94507 ATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTCGCTTTGACATTG 94448 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| || || || || | |||||||| || |||||||| || || || Sbjct 94447 TCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACG 94388 Query 43173 AAGATTTGCATTTTTACGCCGAATACAA 43200 ||||| ||||| ||| || | || |||| Sbjct 94387 AAGATCTGCATCTTTGCGGCAAAAACAA 94360 >seq8379 Length=157374 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||| ||||| || | || || ||||| || || |||||| Sbjct 116273 TCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCGAGCTGTTTCCCGGCGAAT 116214 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | |||||||||||| | || | | |||||||| ||| || ||||| | Sbjct 116213 ATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTCGCTTTGACATTG 116154 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||| || || || || | |||||||| || |||||||| || || || Sbjct 116153 TCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACG 116094 Query 43173 AAGATTTGCATTTTTACGCCGAATACAA 43200 ||||| ||||| ||| || | || |||| Sbjct 116093 AAGATCTGCATCTTTGCGGCAAAAACAA 116066 >seq8726 Length=217380 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||||||||| | |||||| || | || |||||||| || |||||||| || Sbjct 142504 CCTCCTCTTAAACGGAGCACCAAGTGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCG 142563 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || | |||| || || ||||| || ||||| || | || |||||| || | || Sbjct 142564 AGTGTTCTTCCGTCTTCCAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGTGGG 142623 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | |||||||| ||| || ||| | | | | ||||| ||||| || Sbjct 142624 ATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCAGATGATTCAACC 142683 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 || | || || || || |||||||| || || || ||||| ||||||||| Sbjct 142684 TCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTTT 142734 >seq11021 Length=502384 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||||||||| || |||| || || || || || |||||| Sbjct 217114 TCCTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCGTCTTCCAGTTGTTTCCCGGCGAAT 217055 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | |||||||||||| | || | | ||||||| | ||| | || | ||||| | Sbjct 217054 ATCAATCGCTGCTGGTCCGGTGGTATTCCTTCCTTGT-CTTGAATCTTCGCTTTGACATT 216996 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || || || |||| || || || || |||||||| || || || Sbjct 216995 GTCGATGGTGTCAGAGGACTCAACCTCGAGAGTAATAGTCTTTCCCGTTAGGGTTTTCAC 216936 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 216935 GAAGATCTGCAT 216924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571733864460200