Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq11600 138 2e-27 >seq11600 Length=84080 Score = 138 bits (152), Expect = 2e-27 Identities = 184/251 (73%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAA-AA 35523 ||||||||||| | || ||||||| | | || || | || | | | |||| || Sbjct 22329 GATTATACTGGTCATGGATTTGATCAGCTCTCAGATGTAATTAACAAGATTA-AGAACAA 22271 Query 35524 TCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGC 35583 ||| |||||| ||||||| || ||| |||| |||||||| |||||| | || ||||| Sbjct 22270 TCCTGATGATCGAAGGATTATAATGTCGGCTTGGAATCCACCTGATCTTAAGCTGATGGC 22211 Query 35584 TCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643 |||||||||||||| ||| ||| || || ||||| || ||||| ||| | || || || Sbjct 22210 ACTTCCTCCATGCCATATGTTTGCACAGTTCTATGTTGCAAATGGTGAACTTTCATGTCA 22151 Query 35644 GTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATAC 35701 ||||||| || ||| || ||| || | || ||||| || || ||||| |||||| Sbjct 22150 AATGTATCAACGCTCAGCCGATATG--GGTCTTGGTGTGCCGTTTAACATTGCCTCATAC 22093 Query 35702 TCTCTTCTGAC 35712 |||||||| || Sbjct 22092 TCTCTTCTTAC 22082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989435464987825