Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq9882 129 7e-25 >seq9882 Length=79551 Score = 129 bits (142), Expect = 7e-25 Identities = 183/256 (71%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 135834 ATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAAC 135893 |||||||| | | | || | ||| | ||| | || ||| |||| |||||||| || | Sbjct 46244 ATGGTATGTCTATAAGAATCTTTGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGC 46185 Query 135894 ACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTC 135953 ||||| |||| || || || || |||||||| || || ||||| || ||| | || || | Sbjct 46184 ACAACTTTCTTATACACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCC 46125 Query 135954 TGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGG 136013 | || || ||||||| | | | |||| || |||||| | | | || || || || Sbjct 46124 TATTTAGTG-TATGCATAGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAACCACAGAAA 46066 Query 136014 TAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTG 136073 ||||| || | ||||||| |||||||||||| || | || |||||| |||| | Sbjct 46065 ATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAAAAATAAACATACAACTTTGTAG 46006 Query 136074 CTGCTCATGGTTACTT 136089 ||||||||||||| || Sbjct 46005 CTGCTCATGGTTATTT 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627876041936000