Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq9882 111 2e-19 >seq9882 Length=79551 Score = 111 bits (122), Expect = 2e-19 Identities = 179/256 (70%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 171126 ATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAAC 171185 |||||||| | || | |||| |||| |||| ||| ||| | || ||||| || || | Sbjct 46244 ATGGTATGTCTATAAGAATCTTTGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGC 46185 Query 171186 ACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTC 171245 ||||| | || || ||||| || || ||| ||||||||| ||| | ||| | || | Sbjct 46184 ACAACTTTCTTATACACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCC 46125 Query 171246 TCTTCAGTGCAATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGA 171305 | || |||| | |||| ||| | | || || ||| | | ||||| || || || || | Sbjct 46124 TATTTAGTGTA-TGCATAGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAACCACAGAAA 46066 Query 171306 ACGAGAGTCAAAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTG 171365 | || | || | || || | ||||| |||||| || ||||||| ||| |||| | Sbjct 46065 ATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAAAAATAAACATACAACTTTGTAG 46006 Query 171366 CTGCTCATGGATACTT 171381 |||||||||| || || Sbjct 46005 CTGCTCATGGTTATTT 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570185291262600