Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq9990 134 1e-26 seq8641 134 1e-26 seq9253 125 6e-24 seq8798 125 6e-24 seq10330 123 2e-23 seq8634 114 1e-20 seq9269 93.3 4e-14 seq11704 89.7 4e-13 >seq9990 Length=160576 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| |||| || |||| |||||| || Sbjct 159422 ATGCAAATCTTCGTGAAGACTTTGACTGGTAAGACCATTACGCTCGAGGTGGAGAGCTCC 159363 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| |||||| |||||||| || |||||||| ||||| Sbjct 159362 GACACCATTGACAACGTGAAGGCCAAAATCCAAGACAAAGAGGGTATTCCACCGGACCAG 159303 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || ||||||||||| || | || |||| ||| || ||| |||||||||| Sbjct 159302 CAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAAT 159243 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||| || || || || || || || || Sbjct 159242 ATTCAGAAGGAGTCAACCCTTCACTTGGT 159214 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || ||||||||| | ||||| || ||||||| |||| ||||| ||| Sbjct 160106 ATGCAGATCTTCGTAAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 160047 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| || || ||||| ||||| || || || Sbjct 160046 GACACCATCGACAACGTTAAGGCCAAAATCCAGGATAAGGAAGGTATTCCTCCGGATCAG 159987 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| || ||||| || || |||| || | ||| ||| ||| ||||||||| Sbjct 159986 CAGAGGCTTATCTTCGCCGGAAAGCAGCTAGAGGACGGTCGTACTTTGGCTGATTACAAT 159927 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || ||||| || || || || || |||||||| Sbjct 159926 ATCCAGAAGGAATCTACCCTTCACTTGGTTCTAAGGCT 159889 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| ||||| |||| || |||| |||||| || Sbjct 159194 ATGCAAATCTTCGTGAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTGGAGAGCTCC 159135 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| |||| || ||| || || ||||| || ||||| ||||| Sbjct 159134 GACACCATCGACAACGTGAAAGCCAAGATCCAAGATAAGGAAGGCATCCCACCAGACCAG 159075 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || || || | || |||| ||| || ||| ||||||||| Sbjct 159074 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGTACCTTGGCTGATTACAAT 159015 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||| || || || || || || || || Sbjct 159014 ATTCAGAAGGAGTCGACTCTTCACTTGGT 158986 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || ||||| || || ||||||| | || || ||| ||| Sbjct 159650 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACTTTGGAGGTAGAGAGCTCT 159591 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| || || || || || ||||| ||||| Sbjct 159590 GACACCATCGACAACGTTAAGGCGAAAATCCAAGATAAGGAGGGTATCCCACCGGACCAG 159531 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || ||||| || ||| | ||||| | | ||| ||| || |||||| Sbjct 159530 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAAGACGGCAGGACTTTGGCTGACTACAAT 159471 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||| || || || || || || || Sbjct 159470 ATTCAAAAGGAGTCAACCCTTCACTTGGT 159442 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | || || | ||||| || ||| Sbjct 158966 ATGCAGATCTTCGTGAAGACACTTACCGGCAAGACTATAACCCTTGAAGTCGAAAGCTCT 158907 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||||||||| ||||| || ||||| Sbjct 158906 GACACAATTGACAACGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 158847 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || ||||| | || |||| ||| || | | || ||||| Sbjct 158846 CAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGTACCCTTGCTGACTACAAC 158787 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || || || || || || || || ||||| Sbjct 158786 ATCCAGAAGGAGTCTACCCTTCACTTGGTCCTCAGGCT 158749 >seq8641 Length=178042 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| ||||| |||| || |||| |||||| || Sbjct 1155 ATGCAAATCTTCGTGAAGACTTTGACTGGTAAGACCATTACGCTCGAGGTGGAGAGCTCC 1214 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| |||||| |||||||| || |||||||| ||||| Sbjct 1215 GACACCATTGACAACGTGAAGGCCAAAATCCAAGACAAAGAGGGTATTCCACCGGACCAG 1274 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || ||||||||||| || | || |||| ||| || ||| |||||||||| Sbjct 1275 CAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAAT 1334 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||| || || || || || || || || Sbjct 1335 ATTCAGAAGGAGTCAACCCTTCACTTGGT 1363 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || ||||||||| | ||||| || ||||||| |||| ||||| ||| Sbjct 471 ATGCAGATCTTCGTAAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 530 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| || || ||||| ||||| || || || Sbjct 531 GACACCATCGACAACGTTAAGGCCAAAATCCAGGATAAGGAAGGTATTCCTCCGGATCAG 590 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| || ||||| || || |||| || | ||| ||| ||| ||||||||| Sbjct 591 CAGAGGCTTATCTTCGCCGGAAAGCAGCTAGAGGACGGTCGTACTTTGGCTGATTACAAT 650 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || ||||| || || || || || |||||||| Sbjct 651 ATCCAGAAGGAATCTACCCTTCACTTGGTTCTAAGGCT 688 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| ||||| |||| || |||| |||||| || Sbjct 1383 ATGCAAATCTTCGTGAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTGGAGAGCTCC 1442 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| |||| || ||| || || ||||| || ||||| ||||| Sbjct 1443 GACACCATCGACAACGTGAAAGCCAAGATCCAAGATAAGGAAGGCATCCCACCAGACCAG 1502 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || || || | || |||| ||| || ||| ||||||||| Sbjct 1503 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGTACCTTGGCTGATTACAAT 1562 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||| || || || || || || || || Sbjct 1563 ATTCAGAAGGAGTCGACTCTTCACTTGGT 1591 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || ||||| || || ||||||| | || || ||| ||| Sbjct 927 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACTTTGGAGGTAGAGAGCTCT 986 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| || || || || || ||||| ||||| Sbjct 987 GACACCATCGACAACGTTAAGGCGAAAATCCAAGATAAGGAGGGTATCCCACCGGACCAG 1046 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || ||||| || ||| | ||||| | | ||| ||| || |||||| Sbjct 1047 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAAGACGGCAGGACTTTGGCTGACTACAAT 1106 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||| || || || || || || || Sbjct 1107 ATTCAAAAGGAGTCAACCCTTCACTTGGT 1135 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | || || | ||||| || ||| Sbjct 1611 ATGCAGATCTTCGTGAAGACACTTACCGGCAAGACTATAACCCTTGAAGTCGAAAGCTCT 1670 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||||||||| ||||| || ||||| Sbjct 1671 GACACAATTGACAACGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 1730 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || ||||| | || |||| ||| || | | || ||||| Sbjct 1731 CAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGTACCCTTGCTGACTACAAC 1790 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || || || || || || || || ||||| Sbjct 1791 ATCCAGAAGGAGTCTACCCTTCACTTGGTCCTCAGGCT 1828 >seq9253 Length=129212 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || | || || || | || ||| | || || || || || Sbjct 94630 AATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACACTAGAGGTAGAATCATC 94689 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| || || |||| || | || ||||||||||| || ||||| || Sbjct 94690 AGACACAATCGA--CAATGTGAAAGCGAAGATCCAA-GACAAAGAAGGAATCCCACCGGA 94746 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||||| | || || ||||| |||||||| ||||| | | | || | | |||||| Sbjct 94747 TCAACAGCGATTGATCTTCGCCGGAAAACAATTGGAAGACGGTAGAACACTCGCCGATTA 94806 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || |||||||| ||||| ||||| || || | ||||||||||| Sbjct 94807 CAACATCCAGAAAGAATCAACGCTTCATTTGGTACTCCGTCTAAGAGGAGG 94857 >seq8798 Length=192640 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| ||| | ||||| | ||||| ||| ||| Sbjct 21325 ATGCAGATTTTTGTCAAGACCCTTACCGGCAAAACAATCACTTTGGAAGTTGAGAGCTCT 21384 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| || ||| ||||| |||||||| ||||| ||||| Sbjct 21385 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 21444 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| |||||||| || || |||| |||| | || | | || ||||| Sbjct 21445 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGGAGAACACTCGCTGACTACAAC 21504 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| || ||||| || |||||||| || | || ||||| || Sbjct 21505 ATTCAAAAGGAGTCCACTCTCCATTTAGTACTTCGTCTCAGAGGTGG 21551 Score = 114 bits (126), Expect = 1e-20 Identities = 167/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||||||||| || || | || || | || || ||| || Sbjct 21553 ATGCAAATATTTGTCAAGACTTTGACAGGCAAGACAATAACCTTAGAGGTTGAGAGCTCG 21612 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || |||| | || || | ||| ||||| |||||||| ||||| || Sbjct 21613 GACACTATTGACAACGTCA---AGGCTAAGATTCA-GGACAAGGAAGGGATCCCACCGGA 21668 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| | | || || || || ||||| |||| |||| ||| || ||| ||||| Sbjct 21669 CCAACAGAGACTCATCTTCGCTGGGAAACAGCTAGAGGATGGTCGGACATTGGCTGATTA 21728 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 ||| || || || ||||| || || || || || || | || | || ||||| Sbjct 21729 CAACATCCAGAAGGAATCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGAAA 21782 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| ||| ||||||| | ||||| ||| ||| Sbjct 20869 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTTGAGAGCTCT 20928 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| |||||| ||||| ||||| || || || || || Sbjct 20929 GACACTATTGACAACGTCAAGGCTAAAATCCAGGACAAGGAAGGTATCCCTCCCGATCAG 20988 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| || ||||| || || ||||||||| | || | | || ||||| Sbjct 20989 CAGAGGCTTATCTTCGCCGGTAAGCAGCTAGAAGATGGAAGAACACTCGCTGACTACAAC 21048 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| ||||| || ||||| ||||| Sbjct 21049 ATCCAGAAAGAGTCCACTCTCCATTTGGTGCT 21080 Score = 100 bits (110), Expect = 2e-16 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | || || || ||||||| |||| || ||| ||| Sbjct 20641 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTCGAGAGCTCT 20700 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || | ||||| | ||| || || ||||| ||||| || ||| Sbjct 20701 GATACCATCGA--CAATGTTAAGGCAAAGATTCAA-GATAAGGAAGGCATTCCTCCAGAC 20757 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || | | || || || || ||||| | ||||||| || || ||| |||||| Sbjct 20758 CAGCAAAGATTAATCTTCGCTGGTAAACAGCTTGAAGATGGCCGTACCTTGGCTGATTAC 20817 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| |||||||| || || || || || || | ||||||| || Sbjct 20818 AATATTCAGAAAGAATCAACCCTGCACTTGGTTCTTCGATTAAGAGGTGG 20867 >seq10330 Length=49715 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || ||| | ||||| || ||||||| | || ||||| ||| Sbjct 16142 ATGCAGATCTTCGTTAAAACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 16083 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||||||||| ||||| || || || Sbjct 16082 GACACTATCGACAACGTTAAGGCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGATCAG 16023 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | |||| ||||| || ||||| ||||| || | || ||| ||| ||||| ||| Sbjct 16022 CAGAGACTTATCTTTGCTGGAAAACAGTTAGAGGACGGCCGTACTTTGGCTGATTATAAT 15963 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || |||||||| || || ||||| || || ||||| Sbjct 15962 ATCCAGAAAGAATCAACTCTTCATTTGGTTCTCAGGCT 15925 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| ||||| ||||| |||| || | || |||||| ||| Sbjct 15686 ATGCAAATATTTGTCAAGACCTTGACTGGTAAGACCATTACCCTTGAGGTGGAGAGCTCT 15627 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| || ||| || || ||||| || ||||| ||||| Sbjct 15626 GACACCATTGACAACGTGAAAGCCAAGATCCAGGATAAGGAAGGTATCCCACCAGACCAG 15567 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || || || | || |||| |||||| | | || || || Sbjct 15566 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACATTAGCTGACTATAAC 15507 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || || ||||| || || || || || ||| || Sbjct 15506 ATCCAGAAAGAGTCGACCCTTCACTTGGTGTTA 15474 >seq8634 Length=210279 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || || || | || || | || || || || || Sbjct 12243 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCATCC 12184 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || |||| || | || ||||| ||||| || ||||| || Sbjct 12183 GACACAATCGA--CAATGTGAAAGCGAAGATCCAA-GACAAGGAAGGAATCCCACCGGAT 12127 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || || ||||| |||||||||||||| | | ||| | | ||||||| Sbjct 12126 CAGCAGCGATTGATATTCGCCGGAAAACAATTAGAAGACGGAAGGACTCTCGCCGATTAC 12067 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||||| ||||| ||||| |||||| | || |||||||| Sbjct 12066 AACATCCAGAAGGAATCAACGCTTCATTTGGTGCTACGTCTGAGAGGAGG 12017 >seq9269 Length=281999 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||||||||| || |||||||| ||||| || | || ||||| || || ||| | ||| Sbjct 49633 GACAAAGAAGGTATACCACCTGATCAACAAAGGCTCATATTTGCTGGTAAGCAACTTGAA 49692 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| | | ||| | | |||||||| ||||| ||||| || || || ||| | || | Sbjct 49693 GATGGTAGAACTTTAGCTGATTACAACATTCAGAAAGAGTCTACTCTTCATCTTGTCTTG 49752 Query 25212 AGGCTAAGAGGAGG 25225 ||||| ||||| || Sbjct 49753 AGGCTTAGAGGTGG 49766 >seq11704 Length=175292 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||||||||| || ||||| || ||||| || |||| ||||| || |||||| | ||| Sbjct 63403 GACAAAGAAGGTATACCACCAGATCAACAACGACTTATATTTGCTGGTAAACAACTTGAA 63462 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| | | || | | ||||||||||| || ||||| || || || ||| | || | Sbjct 63463 GATGGTAGAACCTTAGCTGATTACAATATCCAGAAAGAGTCTACTCTTCATCTTGTATTG 63522 Query 25212 AGGCTAAGAGGAGG 25225 || || ||||| || Sbjct 63523 AGACTTAGAGGTGG 63536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433266130917725