Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq9882 116 4e-21 >seq9882 Length=79551 Score = 116 bits (128), Expect = 4e-21 Identities = 165/228 (72%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 166543 TTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATATG 166602 |||| || ||| |||| ||||| || ||||||||| | || || ||||| || || ||| Sbjct 46215 TTCAGCTTTATGATTGTATTCCAGGCTGAGCACAACTTTCTTATACACCCATTTCACATG 46156 Query 166603 CTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCGTT 166662 | |||||||| ||||||||| | || || || || | | ||||| | | | || Sbjct 46155 TTAGGTGTAGCTGGTGTATTCAGCGGCTCCCTATT-TAGTGTATGCATAGTTTTTTTGTA 46097 Query 166663 ACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTT 166721 ||||| | | | | || | || ||||| |||| ||| ||| || | ||||||| || Sbjct 46096 ACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACATATT 46038 Query 166722 TGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTT 166769 ||||||||| || | || |||||| | || |||||||||||||| || Sbjct 46037 CGGTCAAGAAAAATAAACATACAACTTTGTAGCTGCTCATGGTTATTT 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567148935964000