Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9990 132 4e-26 seq8641 132 4e-26 seq8798 127 2e-24 seq10212 125 6e-24 seq8848 118 9e-22 seq8379 118 9e-22 seq10330 116 3e-21 seq8634 113 4e-20 seq11021 100 2e-16 seq9253 95.1 1e-14 seq2888 86.0 5e-12 >seq9990 Length=160576 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || ||||| || | || || || ||||| | | || Sbjct 159422 ATGCAAATCTTCGTGAAGACTTTGACTGGTAAGACCATTACGCTCGAGGTGGAGAGCTCC 159363 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||||| |||||||| |||||||||||||| || || Sbjct 159362 GACACCATTGACAACGTGAAGGCCAAAATCCAAGACAAAGAGGGTATTCCACCGGACCAG 159303 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | |||||| || ||| | |||||||||| Sbjct 159302 CAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAAT 159243 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || ||| | || || || ||||| | || |||||| Sbjct 159242 ATTCAGAAGGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGAGGT 159195 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || ||| | ||||| || || | |||||||| ||||| | | | Sbjct 159878 ATGCAAATTTTCGTCAAGACTCTCACCGGAAAGACAATTACTCTTGAGGTGGAGAGCTCT 159819 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||||| || || |||||||||||||| || ||||| Sbjct 159818 GACACCATCGACAACGTTAAGGCCAAAATCCAGGATAAGGAGGGTATTCCTCCGGATCAG 159759 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || ||||| || ||| ||||||| || || | | || |||||| Sbjct 159758 CAGAGGCTAATCTTCGCCGGAAAGCAGCTAGAGGACGGGCGTACTTTGGCTGACTACAAC 159699 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || || || ||| | ||| | ||| Sbjct 159698 ATCCAGAAGGAGTCGACCCTTCATCTCGTT 159669 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| |||||||| || || || || || ||||| | || || || | | | Sbjct 159650 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACTTTGGAGGTAGAGAGCTCT 159591 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||||| ||||| ||||||||||| ||||| || || Sbjct 159590 GACACCATCGACAACGTTAAGGCGAAAATCCAAGATAAGGAGGGTATCCCACCGGACCAG 159531 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| || || | || || | | || | | || ||||| Sbjct 159530 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAAGACGGCAGGACTTTGGCTGACTACAAT 159471 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || ||| | || || || ||||| | || |||||| Sbjct 159470 ATTCAAAAGGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGAGGT 159423 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | ||||| || || |||| || || ||||| | | | Sbjct 158738 ATGCAGATTTTTGTGAAGACACTGACCGGGAAGACCATCACACTGGAGGTGGAGAGCTCT 158679 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||| ||||||||||| || || || Sbjct 158678 GACACGATTGACAATGTGAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 158619 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| ||||| | | || |||||| Sbjct 158618 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTTTGGCTGACTACAAC 158559 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || || || ||| | || || || | || | || || ||||| Sbjct 158558 ATACAGAAGGAGTCAACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTTT 158509 >seq8641 Length=178042 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || ||||| || | || || || ||||| | | || Sbjct 1155 ATGCAAATCTTCGTGAAGACTTTGACTGGTAAGACCATTACGCTCGAGGTGGAGAGCTCC 1214 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||||| |||||||| |||||||||||||| || || Sbjct 1215 GACACCATTGACAACGTGAAGGCCAAAATCCAAGACAAAGAGGGTATTCCACCGGACCAG 1274 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | |||||| || ||| | |||||||||| Sbjct 1275 CAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAAT 1334 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || ||| | || || || ||||| | || |||||| Sbjct 1335 ATTCAGAAGGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGAGGT 1382 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || ||| | ||||| || || | |||||||| ||||| | | | Sbjct 699 ATGCAAATTTTCGTCAAGACTCTCACCGGAAAGACAATTACTCTTGAGGTGGAGAGCTCT 758 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||||| || || |||||||||||||| || ||||| Sbjct 759 GACACCATCGACAACGTTAAGGCCAAAATCCAGGATAAGGAGGGTATTCCTCCGGATCAG 818 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || ||||| || ||| ||||||| || || | | || |||||| Sbjct 819 CAGAGGCTAATCTTCGCCGGAAAGCAGCTAGAGGACGGGCGTACTTTGGCTGACTACAAC 878 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || || || ||| | ||| | ||| Sbjct 879 ATCCAGAAGGAGTCGACCCTTCATCTCGTT 908 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| |||||||| || || || || || ||||| | || || || | | | Sbjct 927 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACTTTGGAGGTAGAGAGCTCT 986 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || ||||| ||||| ||||||||||| ||||| || || Sbjct 987 GACACCATCGACAACGTTAAGGCGAAAATCCAAGATAAGGAGGGTATCCCACCGGACCAG 1046 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| || || | || || | | || | | || ||||| Sbjct 1047 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAAGACGGCAGGACTTTGGCTGACTACAAT 1106 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || ||| | || || || ||||| | || |||||| Sbjct 1107 ATTCAAAAGGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGAGGT 1154 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | ||||| || || |||| || || ||||| | | | Sbjct 1839 ATGCAGATTTTTGTGAAGACACTGACCGGGAAGACCATCACACTGGAGGTGGAGAGCTCT 1898 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||| ||||||||||| || || || Sbjct 1899 GACACGATTGACAATGTGAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 1958 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| ||||| | | || |||||| Sbjct 1959 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTTTGGCTGACTACAAC 2018 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || || || ||| | || || || | || | || || ||||| Sbjct 2019 ATACAGAAGGAGTCAACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTTT 2068 >seq8798 Length=192640 Score = 127 bits (140), Expect = 2e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||||||||| || ||||| | || || || || ||||||| || || || | | Sbjct 20639 AGATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTCGAGAGCT 20698 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | |||||| | ||| || | || ||| |||||||| ||||| || ||||| || || | Sbjct 20699 CTGATACCATCGACAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGACC 20758 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | ||| | | || || || || |||||| | || ||| ||| ||| | | ||||||| Sbjct 20759 AGCAAAGATTAATCTTCGCTGGTAAACAGCTTGAAGATGGCCGTACCTTGGCTGATTACA 20818 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 | ||||| |||||||| ||| | || || ||| | ||||| Sbjct 20819 ATATTCAGAAAGAATCAACCCTGCACTTGGTTCTTCGATT 20858 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | ||||| ||||| ||||| | ||||| || | | | Sbjct 21325 ATGCAGATTTTTGTCAAGACCCTTACCGGCAAAACAATCACTTTGGAAGTTGAGAGCTCT 21384 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || || |||||||| || || ||||| || || Sbjct 21385 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 21444 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| |||||||| || ||| |||||||| | || || | || |||||| Sbjct 21445 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGGAGAACACTCGCTGACTACAAC 21504 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || ||||| | |||||||| Sbjct 21505 ATTCAAAAGGAGTCCACTCTCCATTTAGT 21533 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||||| || || || || | || | || || || | | | Sbjct 21553 ATGCAAATATTTGTCAAGACTTTGACAGGCAAGACAATAACCTTAGAGGTTGAGAGCTCG 21612 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| |||||||| || || ||||| || ||| Sbjct 21613 GACACTATTGACAACGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAA 21672 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || || |||||| |||||||| || || | | ||||||||| Sbjct 21673 CAGAGACTCATCTTCGCTGGGAAACAGCTAGAGGATGGTCGGACATTGGCTGATTACAAC 21732 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || ||||| || | || || ||| Sbjct 21733 ATCCAGAAGGAATCGACTCTTCACTTGGTT 21762 >seq10212 Length=148016 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || || || ||||| |||| |||||||| |||| ||||| || || | Sbjct 127606 AAAAATGCAGATCTTCGTCAAAACCCTAACGGGTAAAACAATCACACTTGAGGTTGAGTC 127665 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || ||| | ||| || | ||| || || ||||||||||| || || ||||| || Sbjct 127666 CTCTGACACCATCGACAATGTGAAAGCTAAGATCCAAGACAAGGAAGGCATCCCACCGGA 127725 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| |||||| | || || ||||| |||||| | || || ||| || || | || || Sbjct 127726 TCAGCAACGTTTGATTTTCGCCGGGAAACAGCTTGAAGACGGCCGTACTCTCGCTGACTA 127785 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| || || ||||| || | ||||| ||| | || | || || ||| Sbjct 127786 CAACATCCAGAAGGAATCAACGCTTCATTTGGTTCTCCGTCTCCGTGGTGGT 127837 >seq8848 Length=112532 Score = 118 bits (130), Expect = 9e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || ||||| |||| ||||| || |||| ||||| || || | Sbjct 94373 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTTGAGTC 94432 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || ||| | ||| || ||||| || || ||||||||||| ||||| ||||| || Sbjct 94433 ATCTGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGTATCCCACCGGA 94492 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || | ||||| ||||| |||||| | || ||| ||| || | | || || Sbjct 94493 CCAGCAGCGATTGATATTCGCCGGGAAACAGCTCGAAGATGGCCGTACTCTAGCTGACTA 94552 Query 22395 CAACATTCAAAAAGAATCCACCATACAT 22422 |||||| || || ||||| || ||||| Sbjct 94553 CAACATCCAGAAGGAATCGACTCTACAT 94580 >seq8379 Length=157374 Score = 118 bits (130), Expect = 9e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || ||||| |||| ||||| || |||| ||||| || || | Sbjct 116079 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTTGAGTC 116138 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || ||| | ||| || ||||| || || ||||||||||| ||||| ||||| || Sbjct 116139 ATCTGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGTATCCCACCGGA 116198 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || | ||||| ||||| |||||| | || ||| ||| || | | || || Sbjct 116199 CCAGCAGCGATTGATATTCGCCGGGAAACAGCTCGAAGATGGCCGTACTCTAGCTGACTA 116258 Query 22395 CAACATTCAAAAAGAATCCACCATACAT 22422 |||||| || || ||||| || ||||| Sbjct 116259 CAACATCCAGAAGGAATCGACTCTACAT 116286 >seq10330 Length=49715 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || ||||||||| | ||||| || || |||| ||||| ||||||| | Sbjct 16144 AGATGCAGATCTTCGTTAAAACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAAAGCT 16085 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| | | || || || || ||||| || || ||||| || |||| Sbjct 16084 CTGACACTATCGACAACGTTAAGGCTAAGATCCAGGACAAAGAAGGCATTCCTCCAGATC 16025 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | ||||| ||||| || |||||||||||||| ||| || | | ||||| | Sbjct 16024 AGCAGAGACTTATCTTTGCTGGAAAACAGTTAGAGGACGGCCGTACTTTGGCTGATTATA 15965 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTT 22428 | || || |||||||| || | ||||| ||| Sbjct 15964 ATATCCAGAAAGAATCAACTCTTCATTTGGTT 15933 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| | || || || | | | Sbjct 15458 ATGCAGATCTTTGTGAAGACACTGACCGGCAAGACCATCACATTGGAGGTAGAGAGCTCT 15399 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || ||||||||||| |||||||| || || || Sbjct 15398 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCGGACCAG 15339 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| ||||| | | || |||||| Sbjct 15338 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACACTTGCTGACTACAAC 15279 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 |||||||| || || ||| | || || || | || | || || ||||| Sbjct 15278 ATTCAAAAGGAGTCAACCCTTCACTTGGTCCTCCGTCTCCGTGGTGGTTT 15229 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || ||||| || || ||| | ||||| || || || | | | Sbjct 15914 ATGCAAATCTTCGTTAAGACCTTAACAGGAAAGACGATTACTCTCGAGGTAGAGAGCTCT 15855 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || ||||| ||||||||||| ||||| || || Sbjct 15854 GACACCATCGACAACGTTAAGGCCAAGATCCAAGATAAGGAGGGTATCCCACCAGACCAG 15795 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| || || | || ||| ||| || | | ||||||||| Sbjct 15794 CAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGATGGCCGAACACTTGCTGATTACAAC 15735 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || || || || | ||| | ||| Sbjct 15734 ATCCAGAAGGAGTCTACACTTCATCTTGTT 15705 >seq8634 Length=210279 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || || ||||| |||| || || ||| | || || || || ||| | Sbjct 12245 AGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCAT 12186 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| || | ||| || | ||| || || ||||||||||| || || ||||| |||| Sbjct 12185 CCGACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATC 12126 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || | ||||| ||||| ||||| ||||| || | || || ||||||||| Sbjct 12125 AGCAGCGATTGATATTCGCCGGAAAACAATTAGAAGACGGAAGGACTCTCGCCGATTACA 12066 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || ||||| || | ||||| || | || || | |||||| Sbjct 12065 ACATCCAGAAGGAATCAACGCTTCATTTGGTGCTACGTCTGAGAGGAGGT 12016 >seq11021 Length=502384 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || || ||||| |||| || || || | ||||| || || || || Sbjct 216922 AGATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACTATTACTCTCGAGGTTGAGTCCT 216981 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| || ||||| || |||||||||||||| || || ||||| || | Sbjct 216982 CTGACACCATCGACAATGTCAAAGCGAAGATTCAAGACAAGGAAGGAATACCACCGGACC 217041 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || | ||||| ||||| ||||| | || || ||| || | | || |||| Sbjct 217042 AGCAGCGATTGATATTCGCCGGGAAACAACTGGAAGACGGCCGTACTCTGGCTGACTACA 217101 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || ||||| || | ||| | ||| | || | || || ||| Sbjct 217102 ACATCCAGAAGGAATCGACGCTTCATCTCGTTCTCCGTCTCCGTGGTGGT 217151 >seq9253 Length=129212 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || ||||| |||| || || || | || || || || ||| | Sbjct 94628 AAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACACTAGAGGTAGAATCA 94687 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || | ||| || || |||||||| || || || ||||| ||| Sbjct 94688 TCAGACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAAGAAGGAATCCCACCGGAT 94747 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| || | || || ||||| ||||| || || || | || || |||||||| Sbjct 94748 CAACAGCGATTGATCTTCGCCGGAAAACAATTGGAAGACGGTAGAACACTCGCCGATTAC 94807 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || |||||||| || | ||||| || Sbjct 94808 AACATCCAGAAAGAATCAACGCTTCATTTGGT 94839 >seq2888 Length=1483 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || ||||| || || ||||||||||| || || ||||| || || Sbjct 4 GACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAG 63 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | ||||| ||||| |||||| | || || ||| || || |||| |||||| Sbjct 64 CAGCGATTGATATTCGCCGGGAAACAGCTGGAAGACGGCCGTACTCTCGCCGACTACAAC 123 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 124 ATCCAAAAGGAATCAAC 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419668072678975