Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq9253 179 9e-40 seq8634 161 2e-34 seq10330 138 3e-27 seq8726 134 3e-26 seq9990 132 1e-25 seq8641 132 1e-25 seq8798 127 5e-24 seq2888 114 3e-20 seq11663 86.0 1e-11 seq8347 86.0 1e-11 seq9186 84.2 5e-11 seq9146 84.2 5e-11 >seq9253 Length=129212 Score = 179 bits (198), Expect = 9e-40 Identities = 176/226 (78%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 ||||| | ||||| ||| |||||| ||||| || || |||||||| || | |||||| Sbjct 94842 AGTACCAAATGAAGCGTTGATTCTTTCTGGATGTTGTAATCGGCGAGTGTTCTACCGTCT 94783 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || ||||||||||| |||||||||| ||||||||| ||||||||||||||| || Sbjct 94782 TCCAATTGTTTTCCGGCGAAGATCAATCGCTGTTGATCCGGTGGGATTCCTTCTTTGTCT 94723 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||||||||| || || || | || |||||||| || || || || ||| Sbjct 94722 TGGATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCTACCTCTAGTGTTATTGTC 94663 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATT-CTAA 288486 ||||| || || || || ||||| ||||||||| |||| || |||| Sbjct 94662 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTTGTTTTTGCTAA 94617 >seq8634 Length=210279 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| ||| || ||||| || || |||||||| || | ||||||| Sbjct 12032 AGCACCAAATGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCGAGAGTCCTTCCGTCT 12091 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 |||||||||||||| ||||| |||| ||||| ||| |||||||||||| || || Sbjct 12092 TCTAATTGTTTTCCGGCGAATATCAATCGCTGCTGATCCGGTGGGATTCCTTCCTTGTCT 12151 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| ||||||||||| || || || | ||| ||||| || || || || |||||| Sbjct 12152 TGGATCTTCGCTTTCACATTGTCGATTGTGTCGGATGATTCAACCTCTAGGGTTATCGTC 12211 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || ||||| |||||||| Sbjct 12212 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 12243 >seq10330 Length=49715 Score = 138 bits (152), Expect = 3e-27 Identities = 172/233 (74%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || || | ||||| || |||||| ||||||||||| || || Sbjct 15916 CCACCACGAAGCCTGAGAACCAAATGAAGAGTTGATTCTTTCTGGATATTATAATCAGCC 15975 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | || || ||||| ||||| |||||||| || ||||| || | ||| || |||| Sbjct 15976 AAAGTACGGCCGTCCTCTAACTGTTTTCCAGCAAAGATAAGTCTCTGCTG---ATCTGGA 16032 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || |||||||| |||||||| || || || ||||| || |||| || ||| | Sbjct 16033 GGAATGCCTTCTTTGTCCTGGATCTTAGCCTTAACGTTGTCGATAGTGTCAGAGCT---T 16089 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct 16090 TCCACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTTTTAACGAAGATCTGCAT 16142 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||||| | || | |||| || ||||| ||||| |||||||| || Sbjct 15460 CCACCACGGAGTCGTAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTATAGTCAGCT 15519 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || ||||| |||||||| |||||||| || |||| Sbjct 15520 AATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 15579 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||||||||| || ||||||||||| || || | || |||| || Sbjct 15580 ATACCTTCCTTATCCTGGATCTTGGCTTTCACGTTGTCAATGGTGTCAGAGCTC---TCC 15636 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || |||| |||||||| ||||| ||||| Sbjct 15637 ACCTCAAGGGTAATGGTCTTACCAGTCAAGGTCTTGACAAATATTTGCAT 15686 >seq8726 Length=217380 Score = 134 bits (148), Expect = 3e-26 Identities = 159/214 (74%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||| |||||||| || || || ||||| || | ||||||||| | ||| Sbjct 142528 TGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCGAGTGTTCTTCCGTCTTCCAGTTGC 142587 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 ||||| |||||||||| | ||| ||| |||||||||||| || || ||||| ||| Sbjct 142588 TTTCCGGCGAAGATCAATCTCTGCTGATCCGGTGGGATTCCTTCCTTGTCTTGGATCTTC 142647 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 |||||||| || || || | || ||||| || || | || || |||||||| || Sbjct 142648 GCTTTCACATTGTCGATTGTGTCAGATGATTCAACCTCTAAGGTTATTGTCTTCCCCGTT 142707 Query 288451 AGAGTCTTGACGAATATCTGCATTATGTTATTCT 288484 || || || ||||| ||||||||| | || |||| Sbjct 142708 AGGGTTTTCACGAAGATCTGCATT-TTTTTTTCT 142740 >seq9990 Length=160576 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | |||| || ||| || |||||||| || || || Sbjct 159880 CCACCACGGAGCCTTAGAACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAATCAGCC 159939 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| |||| || ||||| |||||||| || | ||| ||| || Sbjct 159940 AAAGTACGACCGTCCTCTAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 159999 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| |||||||||||||| || || ||||| || || | || ||| ||| Sbjct 160000 ATACCTTCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTGTCAGAGCT---TTCC 160056 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||| ||||| |||||||| Sbjct 160057 ACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTTACGAAGATCTGCAT 160106 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || |||||||||| || || || ||||| || ||||| || Sbjct 159652 CCACCTCGGAGCCTTAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 159711 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| |||| || ||||| |||||||| || | ||| ||| || Sbjct 159712 AAAGTACGCCCGTCCTCTAGCTGCTTTCCGGCGAAGATTAGCCTCTGCTGATCCGGAGGA 159771 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || |||||||||||||| || || ||||| || || | || |||| || Sbjct 159772 ATACCCTCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTC---TCC 159828 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| |||||||||||||| || ||||| Sbjct 159829 ACCTCAAGAGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATTTGCAT 159878 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| || || || || || || ||||| || Sbjct 158512 CCACCACGGAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGTATGTTGTAGTCAGCC 158571 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||||| || || | || ||||| |||||||| |||||||| || || Sbjct 158572 AAAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 158631 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| |||||||| || || ||||| || || || | || |||| || Sbjct 158632 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACATTGTCAATCGTGTCAGAGCTC---TCC 158688 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| |||||||||||||| ||||| || || |||||||| Sbjct 158689 ACCTCCAGTGTGATGGTCTTCCCGGTCAGTGTCTTCACAAAAATCTGCAT 158738 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||| || || || | || || || || || | || ||||| |||||| Sbjct 159004 TCCTTCTGAATATTGTAATCAGCCAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAG 159063 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || |||||| ||||| ||||| ||||| || ||||||||||| Sbjct 159064 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCTTGGATCTTGGCTTTCACGTTG 159123 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||| || || ||||| || |||| ||||| Sbjct 159124 TCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTC 159180 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 159181 ACGAAGATTTGCAT 159194 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| ||||| ||||| || | || | |||||||| | ||| ||||| |||||| Sbjct 159460 TCCTTTTGAATATTGTAGTCAGCCAAAGTCCTGCCGTCTTCAAGTTGCTTTCCGGCGAAG 159519 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || |||||| || || ||||| ||||||||||| || ||||| Sbjct 159520 ATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTATCTTGGATTTTCGCCTTAACGTTG 159579 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| ||||| || | ||||| ||||| || |||| || || Sbjct 159580 TCGATGGTGTCAGAGCTC---TCTACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTTTTA 159636 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 159637 ACGAAAATTTGCAT 159650 >seq8641 Length=178042 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || | |||| || ||| || |||||||| || || || Sbjct 697 CCACCACGGAGCCTTAGAACCAAGTGAAGGGTAGATTCCTTCTGGATATTGTAATCAGCC 638 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| |||| || ||||| |||||||| || | ||| ||| || Sbjct 637 AAAGTACGACCGTCCTCTAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 578 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| |||||||||||||| || || ||||| || || | || ||| ||| Sbjct 577 ATACCTTCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTGTCAGAGCT---TTCC 521 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||| ||||| |||||||| Sbjct 520 ACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTTACGAAGATCTGCAT 471 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || |||||||||| || || || ||||| || ||||| || Sbjct 925 CCACCTCGGAGCCTTAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 866 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| |||| || ||||| |||||||| || | ||| ||| || Sbjct 865 AAAGTACGCCCGTCCTCTAGCTGCTTTCCGGCGAAGATTAGCCTCTGCTGATCCGGAGGA 806 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || |||||||||||||| || || ||||| || || | || |||| || Sbjct 805 ATACCCTCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTC---TCC 749 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| ||||| |||||||||||||| || ||||| Sbjct 748 ACCTCAAGAGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATTTGCAT 699 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| || || || || || || ||||| || Sbjct 2065 CCACCACGGAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGTATGTTGTAGTCAGCC 2006 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||||| || || | || ||||| |||||||| |||||||| || || Sbjct 2005 AAAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 1946 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || ||||| |||||||| || || ||||| || || || | || |||| || Sbjct 1945 ATACCCTCTTTGTCCTGGATCTTGGCCTTCACATTGTCAATCGTGTCAGAGCTC---TCC 1889 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| |||||||||||||| ||||| || || |||||||| Sbjct 1888 ACCTCCAGTGTGATGGTCTTCCCGGTCAGTGTCTTCACAAAAATCTGCAT 1839 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| ||||| ||||| || | || | |||||||| | ||| ||||| |||||| Sbjct 1117 TCCTTTTGAATATTGTAGTCAGCCAAAGTCCTGCCGTCTTCAAGTTGCTTTCCGGCGAAG 1058 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || |||||| || || ||||| ||||||||||| || ||||| Sbjct 1057 ATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTATCTTGGATTTTCGCCTTAACGTTG 998 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| ||||| || | ||||| ||||| || |||| || || Sbjct 997 TCGATGGTGTCAGAGCTC---TCTACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTTTTA 941 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 940 ACGAAAATTTGCAT 927 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||| || || || | || || || || || | || ||||| |||||| Sbjct 1573 TCCTTCTGAATATTGTAATCAGCCAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAG 1514 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || |||||| ||||| ||||| ||||| || ||||||||||| Sbjct 1513 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTATCTTGGATCTTGGCTTTCACGTTG 1454 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||| || || ||||| || |||| ||||| Sbjct 1453 TCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTC 1397 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 1396 ACGAAGATTTGCAT 1383 >seq8798 Length=192640 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||| | ||| ||||| ||||| || ||||| ||| Sbjct 21095 CCACCACGAAGACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGCG 21036 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||||| || || || |||||||| || | ||| ||| ||| Sbjct 21035 AGTGTTCTTCCATCTTCTAGCTGCTTACCGGCGAAGATAAGCCTCTGCTGATCGGGAGGG 20976 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || ||||||||||| || || ||||| || |||| || |||| || Sbjct 20975 ATACCTTCCTTGTCCTGGATTTTAGCCTTGACGTTGTCAATAGTGTCAGAGCTC---TCA 20919 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| || || ||||| || |||||||| || |||||||| Sbjct 20918 ACTTCCAAAGTGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 20869 >seq2888 Length=1483 Score = 114 bits (126), Expect = 3e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||||| ||| ||| |||||||| || ||||||||| Sbjct 170 CCACCACGGAGACGGAGCACCAGATGAAGCGTTGATTCCTTTTGGATGTTGTAGTCGGCG 111 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||||| || ||||| |||| ||||| || |||| Sbjct 110 AGAGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAATATCAATCGCTGCTGGTCCGGTGGG 51 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTAT 288407 |||||||| || || ||||| |||||||| || || || || Sbjct 50 ATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATTGTCGAT 10 >seq11663 Length=261191 Score = 86.0 bits (94), Expect = 1e-11 Identities = 272/422 (64%), Gaps = 0/422 (0%) Strand=Plus/Plus Query 166933 CATTGTGAACTTTCGCTTCGCAGAATTTTCTGATCAGAACCGGGAACACGTGACCGTTAT 166992 |||||| | |||| ||||| ||| |||| || ||| | || | ||| ||| || | Sbjct 132301 CATTGTTAGCTTTAGCTTCATGGAACCTTCTCATAAGAGCTGGAAGCACATGAGAATTCT 132360 Query 166993 TAAGATCGTATCGGTCATTTGGTCCGCTGAGATTCGTTGGCATCACCGAGACGAAATTAC 167052 | | | |||||| || ||| ||||| || ||||| | |||| || | Sbjct 132361 CTGGGTGAAAATTGTCATTAGGACCGTAAAGATTTGTAGGCATACCAGAGATAGCATCCC 132420 Query 167053 ATCCATATTGTTTTCTGTAAGCATCACACATCTCGATTCCGGCGATTTTCGCTATCGCGT 167112 || || ||| ||| ||||| | |||||||| || || || || || || || || | Sbjct 132421 ATTGATGTTGAATTCGATAAGCTTGACACATCTTAATACCAGCAATCTTAGCAATTGCAT 132480 Query 167113 ATGGTTTGTTAGTGGGTTCGAGAAATCCTGTCATCAGATATTCTTCCTTGATAGGATTTT 167172 | || ||||| ||||| ||| || || | ||| | || ||||| | Sbjct 132481 ACCATTCATTAGTCGGTTCAAGAGGACCAGTGAGAAGAGAAGACTCAGGTATAGGTTGAG 132540 Query 167173 GAGCTTCTTTTGGGTAAATGCAACTGCTACCGAGAAACACGAGTTTTTTCACTCCGAACA 167232 |||| ||| |||||||| ||| ||||||||| | |||||||| || ||| | Sbjct 132541 GAGCAAATTTAGGGTAAATACAAGATGAACCGAGAAAGAGTAGTTTTTTAACACCGTTTA 132600 Query 167233 TTTTGGACGCATGAATGACATTCGTCTGAATCATCAGATTATCGTGAATAAAATCGCCCC 167292 | | || | ||||||||||| ||||| || ||||| ||| ||||| | Sbjct 132601 TGTAAGAAGAGTGAATGACATTGGTCTGGATTTGGAGATTCAAACCAATGAAATCAGCTG 132660 Query 167293 CGAAGGAGTTGTTCGCGTGAATACCTCCTACTTTTGCAGCCGCGAGAAATACGTATTCTG 167352 | | | |||||| || ||||| || || ||||| || || || |||| || || ||| Sbjct 132661 GGTAAGTGTTGTTGGCATGAATCCCACCGACTTTAGCTGCAGCAAGAATGACATAAACTG 132720 Query 167353 GT 167354 || Sbjct 132721 GT 132722 >seq8347 Length=137323 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 72701 AAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGA 72760 |||||||||||||| || |||||||| |||||||||||||||||| |||||||||| Sbjct 16744 AAGAGATTGGGGATTCGCAGGAGATTACGTTGAAGCAATGTGGTTGATGTTGCAACAAGA 16685 Query 72761 TACTCCGGATGACTATGTGATTGCAACAG-GGAA 72793 | || ||||| || || | ||||||| |||| Sbjct 16684 GAAGCCAGATGATTACGTTGTGGCAACAGAGGAA 16651 >seq9186 Length=113070 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 35016 TCTTCTTCCTCGGGAGTGATTTCGTTTTCGATACCGAACACTTTTCGAATCTCTTCCGGA 35075 ||||||||||| ||||||| ||||||| ||| ||| | | |||||||| || ||| Sbjct 85879 TCTTCTTCCTCAGGAGTGAAGTCGTTTTTGATGTTGAAGGTTGTGCGAATCTCGTCTGGA 85820 Query 35076 GTTTTTCCTTTTATTTTATCGGCAATAGCTTTGCATAGAACATCAAGCATACTCTTTATG 35135 ||||| ||||| || |||| || | | || ||| | ||||| | |||||| ||| Sbjct 85819 GTTTTGCCTTTGATCATATCAGCTACTGTTTGACATGTTAGGTCAAGTAAACTCTTGATG 85760 Query 35136 TTCAAGAAATTCGC 35149 |||||| |||| || Sbjct 85759 TTCAAGTAATTAGC 85746 >seq9146 Length=70564 Score = 84.2 bits (92), Expect = 5e-11 Identities = 137/194 (71%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 268461 GTTTCCCATTCAATATCATGATCTGTGGAACATGTACAAGAAGGCAGTGGCAACCTTTTG 268520 |||||| ||||| |||| | | ||| | ||||||||||| || | ||| | || || Sbjct 54809 GTTTCCGATTCATTATCCACAGATCTGGGAGATGTACAAGAAAGCCGAAGCATCATTCTG 54750 Query 268521 GACCACCGAGGAAGTTCCTCTTAACGCA-GACGTTGCAGACTGGCGTGAGAAACTGAACA 268579 |||| |||| ||||| ||| | | || |||| || ||| ||||| || ||| Sbjct 54749 GACCGCCGAAGAAGTAGATCT-ATCACATGACGGACGTGATTGG---GAGAATCTAAACG 54694 Query 268580 ACGATGAACGACACTTCATCAAACATATTCTGGGGTTCTTTGCAGGCTCCGACGGTATCG 268639 ||| |||||| |||||||||||||| |||| | || || || | || || || |||| Sbjct 54693 ACGGTGAACGTCACTTCATCAAACACGTTCTCGCTTTTTTCGCTGCATCAGATGGAATCG 54634 Query 268640 TGATGGAAAATCTT 268653 | | || |||||| Sbjct 54633 TTTTAGAGAATCTT 54620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179477335717770