Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq9990 123 3e-23 seq8641 123 3e-23 seq8798 114 1e-20 seq10330 109 6e-19 seq8726 102 9e-17 seq8848 100 3e-16 seq8379 100 3e-16 seq11021 96.9 4e-15 >seq9990 Length=160576 Score = 123 bits (136), Expect = 3e-23 Identities = 169/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | |||||| ||||| || | || |||||| ||||||||||||||||| Sbjct 158967 ACCTCCACGAAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGC 159026 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || |||||||| |||||||| ||||| ||||||||||| | ||| Sbjct 159027 CAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGG 159086 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || ||||| || ||| || ||| | ||| | | | ||||| |||| | Sbjct 159087 GATGCCTTCCTTATCTTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCGGAGCTC---T 159142 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||| || ||||| || || || | ||||| || ||||||||||| Sbjct 159143 CCACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 159194 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || |||||||||||||||| ||| || |||| ||||||||||| || ||||| Sbjct 159916 TCCTTCTGGATATTGTAATCAGCCAAAGTACGACCGTCCTCTAGCTGCTTTCCGGCGAAG 159975 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | |||||| || | || | | ||||| ||| || |||| | | | ||| Sbjct 159976 ATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCC-TGGATTTTGGCCTTAACGTT 160034 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| ||| |||||| |||| |||||||| || || || || ||||| Sbjct 160035 GTCGATGGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTT 160091 Query 42194 TACAAAGATTTGCAT 42208 ||| ||||| ||||| Sbjct 160092 TACGAAGATCTGCAT 160106 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | |||||| ||||| || | || |||||| |||||||||||||| || Sbjct 159195 ACCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATATTGTAATCGGC 159254 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || |||||||| || || || || | || ||||||||| | ||| Sbjct 159255 CAAGGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCCGGTGG 159314 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||| ||||| |||||| || | ||| | | | ||||| |||| | Sbjct 159315 AATACCCTCTTTGTCTTGGATTTTGGCCTTCA-CGTTGTCAATGGTGTCGGAGCTC---T 159370 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||| ||| ||||| || || || | ||||| || ||||||||||| Sbjct 159371 CCACCTCGAGCGTAATGGTCTTACCAGTCAAAGTCTTCACGAAGATTTGCAT 159422 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||||| ||| || | || || |||||||| |||||||| Sbjct 158547 CTCCTTCTGTATGTTGTAGTCAGCCAAAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAA 158606 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||| |||||| ||| || || | | Sbjct 158607 GATGAGACGCTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGGATCTTGGCCTTCACATT 158666 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| |||| ||||| || | |||||||| || || || || ||||| Sbjct 158667 GTCAATCGTGTCAGAGCTC---TCCACCTCCAGTGTGATGGTCTTCCCGGTCAGTGTCTT 158723 Query 42194 TACAAAGATTTGCAT 42208 ||||| || ||||| Sbjct 158724 CACAAAAATCTGCAT 158738 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | |||||| ||||| || | || |||||||||||||||||| ||||| Sbjct 159423 ACCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTTTGAATATTGTAGTCAGC 159482 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||||| |||| || || ||||| || ||||| || | | ||||||||| | ||| Sbjct 159483 CAAAGTCCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGG 159542 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | |||||| | | || |||| | | | ||| | | | ||||| |||| | Sbjct 159543 GATACCCTCCTTAT-CTTGGATTTTCGCCTTAACGTTGTCGATGGTGTCAGAGCTC---T 159598 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | |||||||| || || || | || || || || |||||||| Sbjct 159599 CTACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 159650 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||||| ||| ||| |||| ||||||||||| || ||||| Sbjct 159687 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGCCCGTCCTCTAGCTGCTTTCCGGCGAA 159746 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | |||||| || | || | | |||||| ||| || |||| | | | ||| Sbjct 159747 GATTAGCCTCTGCTGATCCGGAGGAATACCCTCCTTATCC-TGGATTTTGGCCTTAACGT 159805 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| ||||| || | || || || || || || || |||| Sbjct 159806 TGTCGATGGTGTCAGAGCTC---TCCACCTCAAGAGTAATTGTCTTTCCGGTGAGAGTCT 159862 Query 42193 TTACAAAGATTTGCAT 42208 | || || |||||||| Sbjct 159863 TGACGAAAATTTGCAT 159878 >seq8641 Length=178042 Score = 123 bits (136), Expect = 3e-23 Identities = 169/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | |||||| ||||| || | || |||||| ||||||||||||||||| Sbjct 1610 ACCTCCACGAAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGC 1551 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || |||||||| |||||||| ||||| ||||||||||| | ||| Sbjct 1550 CAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGG 1491 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || ||||| || ||| || ||| | ||| | | | ||||| |||| | Sbjct 1490 GATGCCTTCCTTATCTTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCGGAGCTC---T 1435 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||| || ||||| || || || | ||||| || ||||||||||| Sbjct 1434 CCACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 1383 Score = 107 bits (118), Expect = 2e-18 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || |||||||||||||||| ||| || |||| ||||||||||| || ||||| Sbjct 661 TCCTTCTGGATATTGTAATCAGCCAAAGTACGACCGTCCTCTAGCTGCTTTCCGGCGAAG 602 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || | |||||| || | || | | ||||| ||| || |||| | | | ||| Sbjct 601 ATAAGCCTCTGCTGATCCGGAGGAATACCTTCCTTATCC-TGGATTTTGGCCTTAACGTT 543 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| ||| |||||| |||| |||||||| || || || || ||||| Sbjct 542 GTCGATGGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTT 486 Query 42194 TACAAAGATTTGCAT 42208 ||| ||||| ||||| Sbjct 485 TACGAAGATCTGCAT 471 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | |||||| ||||| || | || |||||| |||||||||||||| || Sbjct 1382 ACCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATATTGTAATCGGC 1323 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || |||||||| || || || || | || ||||||||| | ||| Sbjct 1322 CAAGGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCCGGTGG 1263 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||| ||||| |||||| || | ||| | | | ||||| |||| | Sbjct 1262 AATACCCTCTTTGTCTTGGATTTTGGCCTTCA-CGTTGTCAATGGTGTCGGAGCTC---T 1207 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||| ||| ||||| || || || | ||||| || ||||||||||| Sbjct 1206 CCACCTCGAGCGTAATGGTCTTACCAGTCAAAGTCTTCACGAAGATTTGCAT 1155 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||||| ||| || | || || |||||||| |||||||| Sbjct 2030 CTCCTTCTGTATGTTGTAGTCAGCCAAAGTGCGTCCATCCTCAAGCTGCTTTCCAGCGAA 1971 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||| |||||| ||| || || | | Sbjct 1970 GATGAGACGCTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGGATCTTGGCCTTCACATT 1911 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | |||||| |||| ||||| || | |||||||| || || || || ||||| Sbjct 1910 GTCAATCGTGTCAGAGCTC---TCCACCTCCAGTGTGATGGTCTTCCCGGTCAGTGTCTT 1854 Query 42194 TACAAAGATTTGCAT 42208 ||||| || ||||| Sbjct 1853 CACAAAAATCTGCAT 1839 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | |||||| ||||| || | || |||||||||||||||||| ||||| Sbjct 1154 ACCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTTTGAATATTGTAGTCAGC 1095 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||||| |||| || || ||||| || ||||| || | | ||||||||| | ||| Sbjct 1094 CAAAGTCCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGTGG 1035 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | |||||| | | || |||| | | | ||| | | | ||||| |||| | Sbjct 1034 GATACCCTCCTTAT-CTTGGATTTTCGCCTTAACGTTGTCGATGGTGTCAGAGCTC---T 979 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | |||||||| || || || | || || || || |||||||| Sbjct 978 CTACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTTTTAACGAAAATTTGCAT 927 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||||| ||| ||| |||| ||||||||||| || ||||| Sbjct 890 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGCCCGTCCTCTAGCTGCTTTCCGGCGAA 831 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | |||||| || | || | | |||||| ||| || |||| | | | ||| Sbjct 830 GATTAGCCTCTGCTGATCCGGAGGAATACCCTCCTTATCC-TGGATTTTGGCCTTAACGT 772 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| ||||| || | || || || || || || || |||| Sbjct 771 TGTCGATGGTGTCAGAGCTC---TCCACCTCAAGAGTAATTGTCTTTCCGGTGAGAGTCT 715 Query 42193 TTACAAAGATTTGCAT 42208 | || || |||||||| Sbjct 714 TGACGAAAATTTGCAT 699 >seq8798 Length=192640 Score = 114 bits (126), Expect = 1e-20 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | || ||||| | ||| |||||||||||| ||||| ||||| Sbjct 21552 ACCACCTCTGAGACGAAGTACTAAATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAGC 21493 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | | | || |||||||||||||| || || || || | ||||||||| | ||| Sbjct 21492 GAGTGTTCTCCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGTGG 21433 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||||||||| ||| || |||| ||| | | | ||||| |||| | Sbjct 21432 GATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATAGTGTCAGAGCTC---T 21377 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||| |||||||| || || ||||| ||||| || ||||| Sbjct 21376 CAACTTCCAAAGTGATTGTTTTGCCGGTAAGGGTCTTGACAAAAATCTGCAT 21325 Score = 111 bits (122), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| ||| || || || ||||| ||||| || || | | Sbjct 21084 ACGAAGCACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGCGAGTGTTCTTCC 21025 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || |||||||||||||| ||||| || || | |||||| |||| || | | ||||| Sbjct 21024 ATCTTCTAGCTGCTTACCGGCGAAGATAAGCCTCTGCTGATCGGGAGGGATACCTTCCTT 20965 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| |||||| |||| ||| | | | ||||| |||| || || || | | Sbjct 20964 GTCCTGGATTTTAGCCTTGA-CGTTGTCAATAGTGTCAGAGCTC---TCAACTTCCAAAG 20909 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||||||| || || ||||| |||||||| ||||| Sbjct 20908 TGATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 20869 Score = 111 bits (122), Expect = 2e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| || | ||||| || | || ||||| || || || |||||||| Sbjct 21324 ACCACCTCTTAATCGTAGAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTATAATCAGC 21265 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||||| | || ||||||||||||||||| || || || | ||||||||| | ||| Sbjct 21264 CAAAGTCCGACCATCCTCTAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGTGG 21205 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | ||||||||| ||| | || | ||||| | | | ||||| |||| | Sbjct 21204 GATCCCTTCCTTGTCC-TGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---T 21149 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | || || ||||| || || || ||||| |||||||| ||||| Sbjct 21148 CAACCTCCAAAGTAATAGTTTTTCCAGTAAGGGTCTTAACAAAGATCTGCAT 21097 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| || | ||||| |||| || || || ||||||||||||||||| Sbjct 20868 ACCACCTCTTAATCGAAGAACCAAGTGCAGGGTTGATTCTTTCTGAATATTGTAATCAGC 20809 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || ||||| ||||||||||| || | || |||||||| | || Sbjct 20808 CAAGGTACGGCCATCTTCAAGCTGTTTACCAGCGAAGATTAATCTTTGCTGGTCTGGAGG 20749 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || ||||| | | ||| | |||| | | | | | | | || || |||| | Sbjct 20748 AATGCCTTCCTTAT-CTTGAATCTTTGCCTTAACATTGTCGATGGTATCAGAGCTC---T 20693 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || |||| |||||||| ||||| || || || || || || |||||||| Sbjct 20692 CGACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 20641 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/196 (73%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||||||||||| ||||| | || |||||||| || |||||||| Sbjct 21743 TCCTTCTGGATGTTGTAATCAGCCAATGTCCGACCATCCTCTAGCTGTTTCCCAGCGAAG 21684 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||||| ||| ||||| | ||| | | ||||||||| ||| | || | |||| ||| Sbjct 21683 ATGAGTCTCTGTTGGTCCGGTGGGATCCCTTCCTTGTCC-TGAATCTTAGCCTTGA-CGT 21626 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | || || || ||||| || | |||| Sbjct 21625 TGTCAATAGTGTCCGAGCTC---TCAACCTCTAAGGTTATTGTCTTGCCTGTCAAAGTCT 21569 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| |||||||| Sbjct 21568 TGACAAATATTTGCAT 21553 >seq10330 Length=49715 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| ||||| ||||| || || || | || || |||||||| |||||||| Sbjct 15267 CTCCTTTTGAATGTTGTAGTCAGCAAGTGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 15326 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||| ||| || |||| ||| Sbjct 15327 GATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 15385 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | |||||||| ||||| || || |||| Sbjct 15386 TGTCAATGGTGTCAGAGCTC---TCTACCTCCAATGTGATGGTCTTGCCGGTCAGTGTCT 15442 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 15443 TCACAAAGATCTGCAT 15458 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/219 (70%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 || |||||||| || | || ||| || || || || || ||||| | || || | Sbjct 15472 CGTAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTATAGTCAGCTAATGTGCGACCA 15531 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| |||||||| ||||| ||||||||||| | ||| | | ||||| Sbjct 15532 TCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCTTCCTTA 15591 Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 ||| ||| || ||| | ||| | | | ||||| |||| ||||| || | || Sbjct 15592 TCCTGGATCTTGGCTTTCA-CGTTGTCAATGGTGTCAGAGCTC---TCCACCTCAAGGGT 15647 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || | ||||| ||||| |||||||| Sbjct 15648 AATGGTCTTACCAGTCAAGGTCTTGACAAATATTTGCAT 15686 >seq8726 Length=217380 Score = 102 bits (112), Expect = 9e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||||||||| | |||||| || | || |||||||| || |||||||| || Sbjct 142503 ACCTCCTCTTAAACGGAGCACCAAGTGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGC 142562 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| || || ||||| || ||||| || | || |||||| || | ||| Sbjct 142563 GAGTGTTCTTCCGTCTTCCAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGTGG 142622 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | |||||||| ||| || ||| | | | | ||||| ||||| || Sbjct 142623 GATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATTGTGTCAGATGATTCAAC 142682 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | || || || || |||||||| || || || ||||| |||||||| Sbjct 142683 CTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 142733 >seq8848 Length=112532 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| ||||| ||||| || | || || ||||| || || |||||| Sbjct 94567 TCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCGAGCTGTTTCCCGGCGAAT 94508 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | |||||||||||| | ||| | | |||||||| ||| || ||||| | Sbjct 94507 ATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTCGCTTTGACATTG 94448 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| || || || || | |||||||| || |||||||| || || || Sbjct 94447 TCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACG 94388 Query 42198 AAGATTTGCATTTTCACGCCGAATACAA 42225 ||||| ||||| || || | || |||| Sbjct 94387 AAGATCTGCATCTTTGCGGCAAAAACAA 94360 >seq8379 Length=157374 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| ||||| ||||| || | || || ||||| || || |||||| Sbjct 116273 TCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCGAGCTGTTTCCCGGCGAAT 116214 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | |||||||||||| | ||| | | |||||||| ||| || ||||| | Sbjct 116213 ATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTCGCTTTGACATTG 116154 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| || || || || | |||||||| || |||||||| || || || Sbjct 116153 TCGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACG 116094 Query 42198 AAGATTTGCATTTTCACGCCGAATACAA 42225 ||||| ||||| || || | || |||| Sbjct 116093 AAGATCTGCATCTTTGCGGCAAAAACAA 116066 >seq11021 Length=502384 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| ||||||||||| || |||| || || || || || |||||| Sbjct 217114 TCCTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCGTCTTCCAGTTGTTTCCCGGCGAAT 217055 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | |||||||||||| | ||| | | ||||||| | ||| | || | ||||| | Sbjct 217054 ATCAATCGCTGCTGGTCCGGTGGTATTCCTTCCTTGT-CTTGAATCTTCGCTTTGACATT 216996 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || || || |||| || || || || |||||||| || || || Sbjct 216995 GTCGATGGTGTCAGAGGACTCAACCTCGAGAGTAATAGTCTTTCCCGTTAGGGTTTTCAC 216936 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 216935 GAAGATCTGCAT 216924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543133253275600