Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq9146 145 8e-30 seq10212 127 2e-24 seq8726 118 1e-21 seq8634 113 5e-20 seq11021 111 2e-19 seq9253 109 5e-19 seq8848 109 5e-19 seq8379 109 5e-19 seq2888 109 5e-19 seq9990 102 8e-17 seq8641 102 8e-17 seq10330 100 3e-16 seq8798 96.9 3e-15 >seq9146 Length=70564 Score = 145 bits (160), Expect = 8e-30 Identities = 387/584 (66%), Gaps = 13/584 (2%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 |||||| || || || || ||||| ||||| | || || ||||| || |||||| || Sbjct 54236 GCAAGCGAAATCACAGTGTAAGCCTTCGTCTCGAGAGATTAGTTCATTTGAGAAAGTTAA 54295 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 || |||||||| || ||||| || ||||| || || | || || || || ||||| Sbjct 54296 ACCAGGCATGAGACCTCGTTTCTTTAGCCAGAAGATTGAACAAAAGCTACCGGAGAAGAA 54355 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 || || || || |||||||| || | || || | || || || | | Sbjct 54356 GATACCTTCAACACAAGCGAAAGCTACGATTCGTTCAGCAAAAGT---TTGAGATCCATC 54412 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGCG 133131 |||||| || |||||||| || |||||| | ||||| || || ||||| || ||| Sbjct 54413 GATCCAAGTCATCGCCCATTGTGC--TTTCTTCGTAACGCAAGGGATAGTTTCAATTGCG 54470 Query 133132 TTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAAT 133189 || | | | | |||||| | | | | || || |||| ||| || Sbjct 54471 CGAAAGAGATGATCTCTCTCTTT--ATTATCTTTGATATATGTATCGAGAAGGAGACTAT 54528 Query 133190 ACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT-AAAAGCACCGCGCCTCG 133248 |||| || || || | ||||| || ||||||||||| |||| ||||||| |||||||| Sbjct 54529 ACATCTCAGAATGAATATTCTCAATCGCGATTTGAAATCCGTAAAAAGCA-CGCGCCTCC 54587 Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308 || || || ||| ||| || | ||||| || ||||| || || Sbjct 54588 GAGACTTGAACATCTGACATGAATCGAGAAGCAAGATTCTCTAAAACGATTCCATCTGAT 54647 Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368 || |||||||| || || ||||| |||||||| || || || |||||| | |||| Sbjct 54648 GCAGCGAAAAAAGCGAGAACGTGTTTGATGAAGTGACGTTCACCGTCGTTTAGATTCTCC 54707 Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428 || || || ||| | || || || || || ||| ||||||| || || || |||||| Sbjct 54708 CAATCACGTCCGTCATGTGATAGATCTACTTCTTCGGCGGTCCAGAATGATGCTTCGGCT 54767 Query 133429 TTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAAT 133472 || |||||||| ||| || | | ||| || || ||||| || Sbjct 54768 TTCTTGTACATCTCCCAGATCTGTGGATAATGAATCGGAAACAT 54811 >seq10212 Length=148016 Score = 127 bits (140), Expect = 2e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||||||||| || ||||| ||||| || ||||| ||||| ||||| | || || ||| | Sbjct 127606 AAAAATGCAGATCTTCGTCAAAACCCTAACGGGTAAAACAATCACACTTGAGGTTGAGTC 127665 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | | |||| | | | | | |||| || |||| ||||| || || || || | || Sbjct 127666 CTCTGACACCATCGACAATGTGAAAGCTAAGATCCAAGACAAGGAAGGCATCCCACCGGA 127725 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || || || | |||| ||| || |||||||| || |||| || || ||| ||||| Sbjct 127726 TCAGCAACGTTTGATTTTCGCCGGGAAACAGCTTGAAGACGGCCGTACTCTCGCTGACTA 127785 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| |||||| | ||||| |||||||| || ||| Sbjct 127786 CAACATCCAGAAGGAATCAACGCTTCATTTGGTTCTCCGT 127825 >seq8726 Length=217380 Score = 118 bits (130), Expect = 1e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 ||||||||||| || ||||| ||||| || ||||| || || || ||| | || || || Sbjct 142736 AAAAAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTTGAA 142677 Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 | | |||| | | | | |||| || |||| ||||| || ||||| || | Sbjct 142676 TCATCTGACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCG 142617 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || || ||| | | || | ||| || || || ||||| |||| | || ||| || Sbjct 142616 GATCAGCAGAGATTGATCTTCGCCGGAAAGCAACTGGAAGACGGAAGAACACTCGCGGAT 142557 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||||||| ||||||| || |||||||| ||||| ||||| || Sbjct 142556 TACAACATCCAAAAGGAATCGACGCTTCACTTGGTGCTCCGTTTAAGAGGAGG 142504 >seq8634 Length=210279 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || ||||| || || || ||| | || || || | || Sbjct 12243 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCATCC 12184 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| || |||| ||||| || ||||| || | || || Sbjct 12183 GACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATCAG 12124 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || ||||| | || |||| | || ||| ||| |||||| Sbjct 12123 CAGCGATTGATATTCGCCGGAAAACAATTAGAAGACGGAAGGACTCTCGCCGATTACAAC 12064 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| | ||||| ||||||||||| ||| ||||||| || Sbjct 12063 ATCCAGAAGGAATCAACGCTTCATTTGGTGCTACGTCTGAGAGGAGG 12017 >seq11021 Length=502384 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || ||||| || || || || |||| || ||| || | Sbjct 216924 ATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACTATTACTCTCGAGGTTGAGTCCTCT 216983 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| || || | ||||| || ||||| || | ||||| Sbjct 216984 GACACCATCGACAATGTCAAAGCGAAGATTCAAGACAAGGAAGGAATACCACCGGACCAG 217043 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || ||||| ||||| |||| || || || ||||||||| Sbjct 217044 CAGCGATTGATATTCGCCGGGAAACAACTGGAAGACGGCCGTACTCTGGCTGACTACAAC 217103 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| ||||||| ||| | || || ||| Sbjct 217104 ATCCAGAAGGAATCGACGCTTCATCTCGTTCTCCGT 217139 >seq9253 Length=129212 Score = 109 bits (120), Expect = 5e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 || |||||||| || ||||| ||||| || ||||| || || || || | || || || Sbjct 94625 AACAAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACACTAGAGGTAGAA 94684 Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 | | |||| | | | | |||| || |||| |||||||| ||||| || | Sbjct 94685 TCATCAGACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAAGAAGGAATCCCACCG 94744 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || |||||||| | || | ||| || ||||| |||| |||| | || ||| ||| Sbjct 94745 GATCAACAGCGATTGATCTTCGCCGGAAAACAATTGGAAGACGGTAGAACACTCGCCGAT 94804 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| || ||| | ||||| |||||||| || ||| | ||||| || Sbjct 94805 TACAACATCCAGAAAGAATCAACGCTTCATTTGGTACTCCGTCTAAGAGGAGG 94857 >seq8848 Length=112532 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || ||||| || ||||||||| | || || ||| | Sbjct 94373 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTTGAGTC 94432 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | | |||| || |||| ||||| || || || || | || Sbjct 94433 ATCTGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGTATCCCACCGGA 94492 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| | || | ||| || |||||||| || || | || || || ||||| Sbjct 94493 CCAGCAGCGATTGATATTCGCCGGGAAACAGCTCGAAGATGGCCGTACTCTAGCTGACTA 94552 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| |||||| |||| || ||| | || || ||| Sbjct 94553 CAACATCCAGAAGGAATCGACTCTACATCTCGTCCTCCGT 94592 >seq8379 Length=157374 Score = 109 bits (120), Expect = 5e-19 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || ||||| || ||||||||| | || || ||| | Sbjct 116079 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTTGAGTC 116138 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | | | |||| || |||| ||||| || || || || | || Sbjct 116139 ATCTGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGTATCCCACCGGA 116198 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| | || | ||| || |||||||| || || | || || || ||||| Sbjct 116199 CCAGCAGCGATTGATATTCGCCGGGAAACAGCTCGAAGATGGCCGTACTCTAGCTGACTA 116258 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| |||||| |||| || ||| | || || ||| Sbjct 116259 CAACATCCAGAAGGAATCGACTCTACATCTCGTCCTCCGT 116298 >seq2888 Length=1483 Score = 109 bits (120), Expect = 5e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 38322 AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCG 38381 |||| || |||| ||||| || ||||| || | ||||| ||||| | || | ||| Sbjct 22 AAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGATTGATATTCGCC 81 Query 38382 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACG 38441 || ||||||||||| |||| || || ||| |||||||||||||||||||||| | ||| Sbjct 82 GGGAAACAGCTGGAAGACGGCCGTACTCTCGCCGACTACAACATCCAAAAGGAATCAACG 141 Query 38442 CTGCATTTGGTGCTGCGT 38459 || ||| ||||||| ||| Sbjct 142 CTTCATCTGGTGCTCCGT 159 >seq9990 Length=160576 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || || ||| | || ||||| | | Sbjct 158966 ATGCAGATCTTCGTGAAGACACTTACCGGCAAGACTATAACCCTTGAAGTCGAAAGCTCT 158907 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| |||||||| || ||||| | ||||| Sbjct 158906 GACACAATTGACAACG-TGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCA 158848 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || |||||||| || || | || ||||| |||||||| Sbjct 158847 GCAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGTACCCTTGCTGACTACAA 158788 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| | || || || ||||| || Sbjct 158787 CATCCAGAAGGAGTCTACCCTTCACTTGGTCCT 158755 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || || || | || || ||| | | Sbjct 159878 ATGCAAATTTTCGTCAAGACTCTCACCGGAAAGACAATTACTCTTGAGGTGGAGAGCTCT 159819 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | ||||||| || || ||||| ||||| | || || Sbjct 159818 GACACCATCGACAACG-TTAAGGCCAAAATCCAGGATAAGGAGGGTATTCCTCCGGATCA 159760 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||||| || |||| ||| || | |||||||| Sbjct 159759 GCAGAGGCTAATCTTCGCCGGAAAGCAGCTAGAGGACGGGCGTACTTTGGCTGACTACAA 159700 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| |||| || ||| | || || Sbjct 159699 CATCCAGAAGGAGTCGACCCTTCATCTCGTTCT 159667 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || |||||||| | || || ||| | | Sbjct 158738 ATGCAGATTTTTGTGAAGACACTGACCGGGAAGACCATCACACTGGAGGTGGAGAGCTCT 158679 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || |||| ||||||||||| ||||| | ||||| Sbjct 158678 GACACGATTGACAATG-TGAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCGGACCA 158620 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || || | ||||| | |||||||| Sbjct 158619 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTTTGGCTGACTACAA 158560 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | || || || ||||| || ||| Sbjct 158559 CATACAGAAGGAGTCAACCCTTCACTTGGTCCTTCGT 158523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || ||||| || |||| || ||| | || Sbjct 159422 ATGCAAATCTTCGTGAAGACTTTGACTGGTAAGACCATTACGCTCGAGGTGGAGAGCTCC 159363 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| ||||||||||| ||||| | ||||| Sbjct 159362 GACACCATTGACAACG-TGAAGGCCAAAATCCAAGACAAAGAGGGTATTCCACCGGACCA 159304 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | || ||||| ||||| || || | || ||| | ||| ||||| Sbjct 159303 GCAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAA 159244 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| | || || || ||||| ||||| Sbjct 159243 TATTCAGAAGGAGTCAACCCTTCACTTGGTCTTGCGT 159207 >seq8641 Length=178042 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || || ||| | || ||||| | | Sbjct 1611 ATGCAGATCTTCGTGAAGACACTTACCGGCAAGACTATAACCCTTGAAGTCGAAAGCTCT 1670 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| |||||||| || ||||| | ||||| Sbjct 1671 GACACAATTGACAACG-TGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCA 1729 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || |||||||| || || | || ||||| |||||||| Sbjct 1730 GCAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGTACCCTTGCTGACTACAA 1789 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| | || || || ||||| || Sbjct 1790 CATCCAGAAGGAGTCTACCCTTCACTTGGTCCT 1822 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || || || | || || ||| | | Sbjct 699 ATGCAAATTTTCGTCAAGACTCTCACCGGAAAGACAATTACTCTTGAGGTGGAGAGCTCT 758 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | ||||||| || || ||||| ||||| | || || Sbjct 759 GACACCATCGACAACG-TTAAGGCCAAAATCCAGGATAAGGAGGGTATTCCTCCGGATCA 817 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||||| || |||| ||| || | |||||||| Sbjct 818 GCAGAGGCTAATCTTCGCCGGAAAGCAGCTAGAGGACGGGCGTACTTTGGCTGACTACAA 877 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| |||| || ||| | || || Sbjct 878 CATCCAGAAGGAGTCGACCCTTCATCTCGTTCT 910 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || ||||| || |||| || ||| | || Sbjct 1155 ATGCAAATCTTCGTGAAGACTTTGACTGGTAAGACCATTACGCTCGAGGTGGAGAGCTCC 1214 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| ||||||||||| ||||| | ||||| Sbjct 1215 GACACCATTGACAACG-TGAAGGCCAAAATCCAAGACAAAGAGGGTATTCCACCGGACCA 1273 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | || ||||| ||||| || || | || ||| | ||| ||||| Sbjct 1274 GCAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAA 1333 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| | || || || ||||| ||||| Sbjct 1334 TATTCAGAAGGAGTCAACCCTTCACTTGGTCTTGCGT 1370 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || |||||||| | || || ||| | | Sbjct 1839 ATGCAGATTTTTGTGAAGACACTGACCGGGAAGACCATCACACTGGAGGTGGAGAGCTCT 1898 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || |||| ||||||||||| ||||| | ||||| Sbjct 1899 GACACGATTGACAATG-TGAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCGGACCA 1957 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || || | ||||| | |||||||| Sbjct 1958 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTTTGGCTGACTACAA 2017 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | || || || ||||| || ||| Sbjct 2018 CATACAGAAGGAGTCAACCCTTCACTTGGTCCTTCGT 2054 >seq10330 Length=49715 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| |||||||| | || || ||| | | Sbjct 15458 ATGCAGATCTTTGTGAAGACACTGACCGGCAAGACCATCACATTGGAGGTAGAGAGCTCT 15399 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || ||||| | ||||| Sbjct 15398 GACACCATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCGGACCA 15340 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || || | ||||| || |||||||| Sbjct 15339 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACACTTGCTGACTACAA 15280 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| |||||||| | || || || ||||| || ||| Sbjct 15279 CATTCAAAAGGAGTCAACCCTTCACTTGGTCCTCCGT 15243 >seq8798 Length=192640 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || |||||||||||||| | || || ||| | | Sbjct 20869 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTTGAGAGCTCT 20928 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||||||| ||||| || || || || |||| || Sbjct 20929 GACACTATTGACAACG-TCAAGGCTAAAATCCAGGACAAGGAAGGTATCCCTCCCGATCA 20987 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||||| || || | | || ||| |||||||| Sbjct 20988 GCAGAGGCTTATCTTCGCCGGTAAGCAGCTAGAAGATGGAAGAACACTCGCTGACTACAA 21047 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || || | || || ||||||||||| ||| Sbjct 21048 CATCCAGAAAGAGTCCACTCTCCATTTGGTGCTTCGT 21084 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || |||||||| ||||| | || || ||| | | Sbjct 21325 ATGCAGATTTTTGTCAAGACCCTTACCGGCAAAACAATCACTTTGGAAGTTGAGAGCTCT 21384 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| || || || || | ||||| Sbjct 21385 GACACTATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCA 21443 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || || || ||||| || || | | | || ||| |||||||| Sbjct 21444 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGGAGAACACTCGCTGACTACAA 21503 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| |||||||| | || || ||||| || || ||| | ||||| || Sbjct 21504 CATTCAAAAGGAGTCCACTCTCCATTTAGTACTTCGTCTCAGAGGTGG 21551 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || || | || ||||| || || ||| | || || ||| | | Sbjct 21553 ATGCAAATATTTGTCAAGACTTTGACAGGCAAGACAATAACCTTAGAGGTTGAGAGCTCG 21612 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| || || || || | ||||| Sbjct 21613 GACACTATTGACAACG-TCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCA 21671 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | ||||| | ||| || |||||||| || || | || || | || ||||| Sbjct 21672 ACAGAGACTCATCTTCGCTGGGAAACAGCTAGAGGATGGTCGGACATTGGCTGATTACAA 21731 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| |||| || || ||||| || ||| Sbjct 21732 CATCCAGAAGGAATCGACTCTTCACTTGGTTCTTCGT 21768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500099555945600