Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq9146 116 4e-21 seq11595 109 6e-19 >seq9146 Length=70564 Score = 116 bits (128), Expect = 4e-21 Identities = 119/153 (78%), Gaps = 8/153 (5%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGT----CCAGGCATGAGTCCTCT 119569 ||||| || |||||||| || ||||| ||| ||||| ||||||||||| |||| Sbjct 54258 CCTTCGTCTCGAGAGATTAGTTCATT--TGAG--AAAGTTAAACCAGGCATGAGACCTCG 54313 Query 119570 TTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGC 119629 |||||||||||| ||||| | |||||| || || || |||||||| || || ||||| || Sbjct 54314 TTTCTTTAGCCAGAAGATTGAACAAAAGCTACCGGAGAAGAAGATACCTTCAACACAAGC 54373 Query 119630 GAAAGCGAATAGACGCTCAGCAAAAGGTCGAGA 119662 |||||| | | || |||||||||| | |||| Sbjct 54374 GAAAGCTACGATTCGTTCAGCAAAAGTTTGAGA 54406 >seq11595 Length=173172 Score = 109 bits (120), Expect = 6e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 ||||| || |||||||| | ||| || ||| | ||||||||||||||||| |||| Sbjct 64889 CCTTCGTCTCGAGAGATTAACTCGTTTGAGAAAGTTAATCCAGGCATGAGTCCTCGTTTC 64948 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 |||||||| ||||| | ||||| || || || |||||||| || || ||||| |||||| Sbjct 64949 TTTAGCCAGAAGATAGAGCAAAAGCTACCGGAGAAGAAGATACCTTCAACACAAGCGAAA 65008 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCCA 119686 || | | || ||||| || | | |||| |||| |||| | | ||||| Sbjct 65009 GCTACGATTCGTTCAGCGAAGGTTTGAGATCCATCGATCCACGTCATCGCCCA 65061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588889751827000