Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq9882 134 2e-26 >seq9882 Length=79551 Score = 134 bits (148), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 164262 ATCTCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGATGCAC 164321 |||| ||| | |||| || ||| | || ||||| || ||||||||| | || || ||| Sbjct 46227 ATCTTTGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGCACAACTTTCTTATACAC 46168 Query 164322 CCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCAC 164381 || || || ||| | || || ||||| ||||| |||| || || || |||| | |||| Sbjct 46167 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCCTATTTAGTGTA-TGCAT 46109 Query 164382 GGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTAT 164441 ||| | | || |||||| || | | |||||||| |||| ||| || || | Sbjct 46108 AGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 46049 Query 164442 GGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTT 164501 ||||||| || ||||||||| || ||||||||||| |||| || ||||| ||||| ||| Sbjct 46048 GGTTACATATTCGGTCAAGAAAAATAAACATACAACTTTGTAGCTGCTCATGGTTATTTT 45989 Query 164502 G 164502 | Sbjct 45988 G 45988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556843245324600