Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq9882 140 4e-28 >seq9882 Length=79551 Score = 140 bits (154), Expect = 4e-28 Identities = 190/264 (72%), Gaps = 1/264 (0%) Strand=Plus/Minus Query 168943 TTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCA 169002 ||| | | |||||||| || || |||| | ||| | |||| ||| ||| | |||||||| Sbjct 46252 TTTTTTTTATGGTATGTCTATAAGAATCTTTGGTATTTTCAGCTTTATGATTGTATTCCA 46193 Query 169003 AGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGG 169062 || ||||||||| ||||||| || || || || ||| ||| ||||| ||| | ||| | Sbjct 46192 GGCTGAGCACAACTTTCTTATACACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAG 46133 Query 169063 TGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGAC 169122 || || ||||| | | ||||| ||| ||||||| ||| | | ||||| || || Sbjct 46132 CGGCTCCCTATTTAGTGTA-TGCATAGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAAC 46074 Query 169123 TACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAA 169182 || || | |||||| || | ||||||| |||||||||||| || |||| || || Sbjct 46073 CACAGAAAATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAAAAATAAACATACAA 46014 Query 169183 TATTGTTGCAGCACATGGATACTT 169206 |||| || || ||||| || || Sbjct 46013 CTTTGTAGCTGCTCATGGTTATTT 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564358944583200