Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq9882 156 6e-33 >seq9882 Length=79551 Score = 156 bits (172), Expect = 6e-33 Identities = 195/266 (73%), Gaps = 1/266 (0%) Strand=Plus/Minus Query 215746 TTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCA 215805 ||| | | ||| |||| | | |||||| ||| | |||| || ||| |||| ||||| Sbjct 46252 TTTTTTTTATGGTATGTCTATAAGAATCTTTGGTATTTTCAGCTTTATGATTGTATTCCA 46193 Query 215806 GGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGG 215865 ||||||||||||| |||| || |||||||| |||||||||||||| |||||||| ||| | Sbjct 46192 GGCTGAGCACAACTTTCTTATACACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAG 46133 Query 215866 TGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGAC 215925 || || | || || ||||| ||| |||| || ||| | | ||||| || || Sbjct 46132 CGGCTCCCTATTTAGTG-TATGCATAGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAAC 46074 Query 215926 AACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAA 215985 || || | |||||| || | ||||||| ||||| ||||| | |||||||||| Sbjct 46073 CACAGAAAATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAAAAATAAACATACAA 46014 Query 215986 CATCGTAGCTGCACACGGTTACTTTG 216011 | | |||||||| || ||||| |||| Sbjct 46013 CTTTGTAGCTGCTCATGGTTATTTTG 45988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744972492113200