Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq9882 134 2e-26 >seq9882 Length=79551 Score = 134 bits (148), Expect = 2e-26 Identities = 184/256 (72%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 170152 GGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCAC 170211 || ||| || || | |||| |||| || | ||| ||| | |||||||| || |||||| Sbjct 46242 GGTATGTCTATAAGAATCTTTGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGCAC 46183 Query 170212 AACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTC 170271 ||| ||||||| |||||||| || ||| ||| || |||||| | ||| | || | || Sbjct 46182 AACTTTCTTATACACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCCTA 46123 Query 170272 TTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAAC 170331 || | | |||| ||| ||||||| ||| | | ||||| || || ||||| || Sbjct 46122 TTTAGTGTA-TGCATAGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAAT 46064 Query 170332 GAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCA 170391 || || || | || |||| |||||| |||||| || ||||||||||| |||| || Sbjct 46063 GAATCTGCTAATGAAGGTTACATATTCGGTCAAGAAAAATAAACATACAACTTTGTAGCT 46004 Query 170392 GCACATGGATACTTTG 170407 || ||||| || |||| Sbjct 46003 GCTCATGGTTATTTTG 45988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582762649196000