Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq9882 136 5e-27 >seq9882 Length=79551 Score = 136 bits (150), Expect = 5e-27 Identities = 167/227 (74%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 84240 AAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACCA 84299 || || || |||||||| |||| || || |||| | |||||||||||| ||||||| Sbjct 45990 AAATAACCATGAGCAGCTACAAAGTTGTATGTTTATTTTTCTTGACCGAATATGTAACCT 46049 Query 84300 TAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCA 84359 | || || |||||||||| ||||| | ||| | | |||||| |||| ||| | Sbjct 46050 TCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAAGTTACAAAAAAACTA 46109 Query 84360 TGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAGGGA 84419 ||||| || ||||| | || | |||||||||||| || || ||||||||||| || Sbjct 46110 TGCATA-CACTAAATAGGGAGCCGCTGAATACACCAGCTACACCTAACATGTGAAATGGG 46168 Query 84420 TGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAA 84466 || ||||| | ||| || || |||||||| |||| ||| || |||| Sbjct 46169 TGTATAAGAAAGTTGTGCTCAGCCTGGAATACAATCATAAAGCTGAA 46215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571189944122200