Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq8709 122 2e-22 >seq8709 Length=314615 Score = 122 bits (134), Expect = 2e-22 Identities = 314/470 (67%), Gaps = 10/470 (2%) Strand=Plus/Plus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTT-GATGATCTAATTCAGA 150365 || ||| || ||||||||| | |||||||| || || || || || | | || Sbjct 16020 AGCAGGGAAGCTTGATCCAGTGATTGGTCGTGATGAGGAGATTAGAAGAGTTG-TGAGGA 16078 Query 150366 TTCTTTCTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGTTGGTAAAA 150425 ||||||| | | ||| || || ||| || | | |||| || ||||| |||||||||| Sbjct 16079 TTCTTTCAAGAAGAACTAAGAACAATCCTGTGCTTATTGGAGAGCCAGGAGTTGGTAAAA 16138 Query 150426 CACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTATGA 150485 | | ||||| || ||||||||| | || | || || |||||||| || | | | Sbjct 16139 CTGCTGTTGTTGAAGGTTTAGCACAAAGGATTGTGAAAGGAGATGTTCCTAATAGTCTTA 16198 Query 150486 AAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCGTG 150545 ||||| | | |||||||| | |||||||| || ||||||| ||||||| || | Sbjct 16199 CTGATGTAAGATTGATTTCTTTGGACATGGGTGCTTTGGTTGCTGGTGCTAAGTACCGAG 16258 Query 150546 GTGAATTCGAAGAACGTGTAGACAATTTGCTACAAGAACTAAAAGAA-CGCGATG--ATG 150602 | || || |||||| | || | | | | ||||| | ||||| | | | | | | Sbjct 16259 GAGAGTTTGAAGAAAGATTAAAAGCTGTATTGAAAGAAGTTGAAGAAGCTCAAGGGAAAG 16318 Query 150603 TTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGCGGCGGTT 150662 | ||||| || || ||||| || ||| || | ||||||||| |||| | || | Sbjct 16319 TGATTCTCTTTATTGATGAGATTCATTTGGTTCTTGGTGCTGGTAAGACT---GAAGGAT 16375 Query 150663 CTTTGGATATGAGC-AATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCGTGTCATC 150721 | ||||| ||| ||| |||| || ||| || || | ||| | ||||| ||| Sbjct 16376 CAATGGAT-GCAGCAAATCTGTTCAAGCCTATGTTAGCTAGAGGTCAGCTTCGTTGCATT 16434 Query 150722 GGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGC 150771 ||||| ||||| || || ||| | ||| | |||| |||||||| || Sbjct 16435 GGTGCTACAACACTTGAAGAGTATAGAAAATATGTTGAGAAAGATGCTGC 16484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147418148474070