Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq9882 138 1e-27 >seq9882 Length=79551 Score = 138 bits (152), Expect = 1e-27 Identities = 173/236 (73%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 162981 TGGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTT 163040 ||||| ||| | || ||| | || ||||| || ||||||||| | || || ||||| || Sbjct 46222 TGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGCACAACTTTCTTATACACCCATT 46163 Query 163041 CCATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTC 163100 || ||| | || || || ||||||||| | || || || ||||||| |||||| ||| Sbjct 46162 TCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCCTATTTAGTG-TATGCATAGTTT 46104 Query 163101 TCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTA 163160 | |||| |||||| | | ||||| ||||| || || | || || || | ||||| Sbjct 46103 TTTTGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 46044 Query 163161 TAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTG 163216 | ||||| |||||| || | || |||||| |||| ||||||||||| || |||| Sbjct 46043 CATATTCGGTCAAGAAAAATAAACATACAACTTTGTAGCTGCTCATGGTTATTTTG 45988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553003807644600