Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq11110 113 2e-20 >seq11110 Length=291012 Score = 113 bits (124), Expect = 2e-20 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 |||| ||||| || ||||| ||||| || || |||| ||||| |||||||| || || Sbjct 226130 TACCCTTTCTCTTGCCTCCTCCTTGGTCAACATATCGAGCAGTATCATTGAATACACGCA 226189 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 |||||||||| | ||| | || ||| ||||||| | |||| | ||| | | | Sbjct 226190 ACATTGGAACAATACCATTAGATGTTCCATTTGTGCCACGAATGTAACTTCCAGATGCAC 226249 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTG 26243 |||| ||| || || ||| || |||||||| |||| ||| | ||||| ||| Sbjct 226250 GGATATTATGAACAGAAACACCAATACCACCAGCAGATTTGCTTATAACAGCACACTCTT 226309 Query 26244 AAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACA 26298 | ||||||| |||| || | ||||||||| ||||||| | | || |||||| Sbjct 226310 TGAGTGTATCGTAAATGCCCTCAATGCTATCATCTTTCATGCAGATTAGAAAACA 226364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253003871818625