Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq9882 120 3e-22 >seq9882 Length=79551 Score = 120 bits (132), Expect = 3e-22 Identities = 172/241 (71%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 166244 GAATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGC 166303 |||||| || | |||| || ||| | || ||||| ||||||||||| |||| || | Sbjct 46229 GAATCTTTGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGCACAACTTTCTTATAC 46170 Query 166304 ATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGC 166363 | || || || ||| | || || ||||| ||||| | ||| | ||||||| ||||| Sbjct 46169 ACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCCTATTTAGTG-TATGC 46111 Query 166364 ACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACT 166423 | | ||| || |||||| | | | || || || || |||| ||||| || Sbjct 46110 ATAGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 46051 Query 166424 ACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACT 166483 | ||||||| ||||| |||||| || ||||||||||| | ||||| ||||||||||| | Sbjct 46050 AAGGTTACATATTCGGTCAAGAAAAATAAACATACAACTTTGTAGCTGCTCATGGTTATT 45991 Query 166484 T 166484 | Sbjct 45990 T 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561165812246000