Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq9882 122 1e-22 >seq9882 Length=79551 Score = 122 bits (134), Expect = 1e-22 Identities = 171/239 (72%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 155446 ATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCAC 155505 |||| ||||| ||| | || |||| | || ||||| || || ||||| | ||||| ||| Sbjct 46227 ATCTTTGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGCACAACTTTCTTATACAC 46168 Query 155506 CCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCAC 155565 || || |||||| | || ||||| ||||| ||| | || || || || || |||||| Sbjct 46167 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCCTATTTAGTG-TATGCAT 46109 Query 155566 GGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTAT 155625 ||| || || || ||| | ||| | ||||| || || | || ||| || | Sbjct 46108 AGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 46049 Query 155626 GGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTT 155684 ||||||| ||||| |||||| || |||| || ||| |||| ||||||||||| || || Sbjct 46048 GGTTACATATTCGGTCAAGAAAAATAAACATACAACTTTGTAGCTGCTCATGGTTATTT 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584749558195400