Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq9882 152 6e-32 >seq9882 Length=79551 Score = 152 bits (168), Expect = 6e-32 Identities = 175/234 (75%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 67629 AAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCG 67688 || || ||||||||||| |||| |||||| || | || |||||| ||||| ||||||| Sbjct 45990 AAATAACCATGAGCAGCTACAAAGTTGTATGTTTATTTTTCTTGACCGAATATGTAACCT 46049 Query 67689 TAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCG 67748 | || || || | || || ||||| ||||| | | |||||| |||| | ||| Sbjct 46050 TCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAAGTTACAAAAAAACTA 46109 Query 67749 TGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACTCCAAGCATATGGAATGGG 67808 |||||| ||||||| || || || | ||||||||| ||||| || | ||| || |||||| Sbjct 46110 TGCATA-CACTAAATAGGGAGCCGCTGAATACACCAGCTACACCTAACATGTGAAATGGG 46168 Query 67809 TGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCA 67862 || ||||| | ||||||||| || ||||| || | ||| || | ||| ||||| Sbjct 46169 TGTATAAGAAAGTTGTGCTCAGCCTGGAATACAATCATAAAGCTGAAAATACCA 46222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566864177669400