Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq9882 116 4e-21 >seq9882 Length=79551 Score = 116 bits (128), Expect = 4e-21 Identities = 180/256 (70%), Gaps = 1/256 (0%) Strand=Plus/Minus Query 72695 ATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAAC 72754 |||||||| | || | |||| |||| |||| ||| ||| | || ||||| || || | Sbjct 46244 ATGGTATGTCTATAAGAATCTTTGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGC 46185 Query 72755 ACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTC 72814 ||||| | || || ||||| || || ||| ||||||||| ||| | ||| | || | Sbjct 46184 ACAACTTTCTTATACACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCC 46125 Query 72815 TCTTCAGTGCAATGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGA 72874 | || |||| | |||| ||| |||| ||||| | | ||||| || || ||||| | Sbjct 46124 TATTTAGTGTA-TGCATAGTTTTTTTGTAACTTCTAGTTTGATCAGGGAAACCACAGAAA 46066 Query 72875 ACGAGAGTCAAAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTG 72934 | || | || | || || | ||||| |||||| || ||||||| ||| |||| | Sbjct 46065 ATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAAAAATAAACATACAACTTTGTAG 46006 Query 72935 CTGCTCATGGATACTT 72950 |||||||||| || || Sbjct 46005 CTGCTCATGGTTATTT 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572789709822200