Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq8726 140 3e-28 seq9253 138 1e-27 seq11021 129 5e-25 seq10212 129 5e-25 seq9990 129 5e-25 seq8641 129 5e-25 seq8634 127 2e-24 seq8848 116 3e-21 seq8379 116 3e-21 seq10330 114 1e-20 seq8798 114 1e-20 seq2888 87.8 2e-12 seq8683 86.0 6e-12 >seq8726 Length=217380 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| || || || || || | || || ||| | | Sbjct 142730 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCTTAGAGGTTGAATCATCT 142671 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| |||||||||||||| |||||||| || || ||||| Sbjct 142670 GACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATCAG 142611 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| ||||| || || ||||| || |||| | | ||||| ||| Sbjct 142610 CAGAGATTGATCTTCGCCGGAAAGCAACTGGAAGACGGAAGAACACTCGCGGATTACAAC 142551 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||||||||| || ||||||||| | || || | ||||| Sbjct 142550 ATCCAAAAGGAATCGACGCTTCACTTGGTGCTCCGTTTAAGAGGAGG 142504 >seq9253 Length=129212 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| || || || || || || || |||||| | | Sbjct 94631 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACACTAGAGGTAGAATCATCA 94690 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| ||||||||||||||||||||||| || || |||||| Sbjct 94691 GACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAAGAAGGAATCCCACCGGATCAA 94750 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| ||||| ||||| |||| || |||| | | ||||| ||| Sbjct 94751 CAGCGATTGATCTTCGCCGGAAAACAATTGGAAGACGGTAGAACACTCGCCGATTACAAC 94810 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || ||||| || || || ||||| Sbjct 94811 ATCCAGAAAGAATCAACGCTTCATTTGGT 94839 >seq11021 Length=502384 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || |||||||| ||||| || || || | Sbjct 216923 GATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACTATTACTCTCGAGGTTGAGTCCTC 216982 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| ||||| |||||||| ||||||||||| || || || Sbjct 216983 TGACACCATCGACAATGTCAAAGCGAAGATTCAAGACAAGGAAGGAATACCACCGGACCA 217042 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||| || ||||||||||| ||||| || | | || | || || || Sbjct 217043 GCAGCGATTGATATTCGCCGGGAAACAACTGGAAGACGGCCGTACTCTGGCTGACTACAA 217102 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||||||||| || || Sbjct 217103 CATCCAGAAGGAATCGACGCTTCA 217126 >seq10212 Length=148016 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| |||||||| || || || || || || || | Sbjct 127610 ATGCAGATCTTCGTCAAAACCCTAACGGGTAAAACAATCACACTTGAGGTTGAGTCCTCT 127669 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| ||||| || || || ||||| Sbjct 127670 GACACCATCGACAATGTGAAAGCTAAGATCCAAGACAAGGAAGGCATCCCACCGGATCAG 127729 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| || |||||||||||||| || || | | | | || || ||| Sbjct 127730 CAACGTTTGATTTTCGCCGGGAAACAGCTTGAAGACGGCCGTACTCTCGCTGACTACAAC 127789 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || || ||||| Sbjct 127790 ATCCAGAAGGAATCAACGCTTCATTTGGT 127818 >seq9990 Length=160576 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || ||||| || ||||||||||| || || | || Sbjct 159422 ATGCAAATCTTCGTGAAGACTTTGACTGGTAAGACCATTACGCTCGAGGTGGAGAGCTCC 159363 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| |||||||||||||| || || || || || || Sbjct 159362 GACACCATTGACAACGTGAAGGCCAAA-ATCCAAGACAAAGAGGGTATTCCACCGGACCA 159304 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||| || ||||| |||||| | | | || | ||||| || Sbjct 159303 GCAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAA 159244 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || || |||||||| ||||| | || ||||| Sbjct 159243 TATTCAGAAGGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGAGG 159196 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || ||||| || ||||| ||||| || || | || Sbjct 159194 ATGCAAATCTTCGTGAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTGGAGAGCTCC 159135 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| || ||||| || || || || || Sbjct 159134 GACACCATCGACAACGTGAAAGCCAAGATCCAAGATAAGGAAGGCATCCCACCAGACCAG 159075 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | || | ||||| || Sbjct 159074 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGTACCTTGGCTGATTACAAT 159015 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| ||||| || |||||||| ||||| | || ||||| Sbjct 159014 ATTCAGAAGGAGTCGACTCTTCACTTGGTCTTGCGTCTTCGTGGAGG 158968 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || ||||| || || ||||| ||| | | Sbjct 158966 ATGCAGATCTTCGTGAAGACACTTACCGGCAAGACTATAACCCTTGAAGTCGAAAGCTCT 158907 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| ||||||||||| || ||||| || || Sbjct 158906 GACACAATTGACAACGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 158847 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || |||||||| |||||| | | | | | || || ||| Sbjct 158846 CAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGTACCCTTGCTGACTACAAC 158787 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || |||||||| Sbjct 158786 ATCCAGAAGGAGTCTACCCTTCACTTGGT 158758 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || ||||| || ||| | | Sbjct 160107 GATGCAGATCTTCGTAAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTC 160048 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| ||| | ||| ||||| || || ||||| || ||||| |||| Sbjct 160047 TGACACCATCGACAACGTTAAGGCCAAA-ATCCAGGATAAGGAAGGTATTCCTCCGGATC 159989 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | ||||| ||||| || ||||| ||||| | | || | ||||| | Sbjct 159988 AGCAGAGGCTTATCTTCGCCGGAAAGCAGCTAGAGGACGGTCGTACTTTGGCTGATTACA 159929 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 | || || |||||||| || || |||||||| Sbjct 159928 ATATCCAGAAGGAATCTACCCTTCACTTGGT 159898 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | || || || || || || | || ||||| | | Sbjct 159650 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACTTTGGAGGTAGAGAGCTCT 159591 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| |||||||| || || || || || || || || Sbjct 159590 GACACCATCGACAACGTTAAGGCGAAA-ATCCAAGATAAGGAGGGTATCCCACCGGACCA 159532 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||| ||||| || || || || || || | || | || || || Sbjct 159531 GCAGAGGTTGATCTTCGCCGGAAAGCAACTTGAAGACGGCAGGACTTTGGCTGACTACAA 159472 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| || || || |||||||| ||||| | || ||||| Sbjct 159471 TATTCAAAAGGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGAGG 159424 >seq8641 Length=178042 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || ||||| || ||||||||||| || || | || Sbjct 1155 ATGCAAATCTTCGTGAAGACTTTGACTGGTAAGACCATTACGCTCGAGGTGGAGAGCTCC 1214 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| |||||||||||||| || || || || || || Sbjct 1215 GACACCATTGACAACGTGAAGGCCAAA-ATCCAAGACAAAGAGGGTATTCCACCGGACCA 1273 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||| || ||||| |||||| | | | || | ||||| || Sbjct 1274 GCAGAGATTGATCTTTGCCGGCAAGCAGCTTGAGGATGGTCGTACCTTGGCCGATTACAA 1333 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || || |||||||| ||||| | || ||||| Sbjct 1334 TATTCAGAAGGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGAGG 1381 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || ||||| || ||||| ||||| || || | || Sbjct 1383 ATGCAAATCTTCGTGAAGACCTTGACTGGTAAGACCATTACCCTCGAGGTGGAGAGCTCC 1442 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| || ||||| || || || || || Sbjct 1443 GACACCATCGACAACGTGAAAGCCAAGATCCAAGATAAGGAAGGCATCCCACCAGACCAG 1502 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | || | ||||| || Sbjct 1503 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGTACCTTGGCTGATTACAAT 1562 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| ||||| || |||||||| ||||| | || ||||| Sbjct 1563 ATTCAGAAGGAGTCGACTCTTCACTTGGTCTTGCGTCTTCGTGGAGG 1609 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || ||||| || || ||||| ||| | | Sbjct 1611 ATGCAGATCTTCGTGAAGACACTTACCGGCAAGACTATAACCCTTGAAGTCGAAAGCTCT 1670 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| ||||||||||| || ||||| || || Sbjct 1671 GACACAATTGACAACGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 1730 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || |||||||| |||||| | | | | | || || ||| Sbjct 1731 CAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGTACCCTTGCTGACTACAAC 1790 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || |||||||| Sbjct 1791 ATCCAGAAGGAGTCTACCCTTCACTTGGT 1819 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || ||||| || ||| | | Sbjct 470 GATGCAGATCTTCGTAAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTC 529 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| ||| | ||| ||||| || || ||||| || ||||| |||| Sbjct 530 TGACACCATCGACAACGTTAAGGCCAAA-ATCCAGGATAAGGAAGGTATTCCTCCGGATC 588 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | ||||| ||||| || ||||| ||||| | | || | ||||| | Sbjct 589 AGCAGAGGCTTATCTTCGCCGGAAAGCAGCTAGAGGACGGTCGTACTTTGGCTGATTACA 648 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 | || || |||||||| || || |||||||| Sbjct 649 ATATCCAGAAGGAATCTACCCTTCACTTGGT 679 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | || || || || || || | || ||||| | | Sbjct 927 ATGCAAATTTTCGTTAAAACCTTGACTGGAAAGACCATCACTTTGGAGGTAGAGAGCTCT 986 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| |||||||| || || || || || || || || Sbjct 987 GACACCATCGACAACGTTAAGGCGAAA-ATCCAAGATAAGGAGGGTATCCCACCGGACCA 1045 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||| ||||| || || || || || || | || | || || || Sbjct 1046 GCAGAGGTTGATCTTCGCCGGAAAGCAACTTGAAGACGGCAGGACTTTGGCTGACTACAA 1105 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| || || || |||||||| ||||| | || ||||| Sbjct 1106 TATTCAAAAGGAGTCAACCCTTCACTTGGTCTTGCGTCTTCGTGGAGG 1153 >seq8634 Length=210279 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || || || || ||| | | Sbjct 12244 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCATC 12185 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||||| | || | || ||| |||||||||||||| |||||||| || || ||||| Sbjct 12184 CGACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATCCCACCGGATCA 12125 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||| || ||||| ||||| | || || || | | | ||||| || Sbjct 12124 GCAGCGATTGATATTCGCCGGAAAACAATTAGAAGACGGAAGGACTCTCGCCGATTACAA 12065 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||||| || || || |||||| | || || | ||||| Sbjct 12064 CATCCAGAAGGAATCAACGCTTCATTTGGTGCTACGTCTGAGAGGAGG 12017 >seq8848 Length=112532 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| ||||| || || || || || || || | | Sbjct 94376 GATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTTGAGTCATC 94435 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| |||||||||||||| ||||| || || || || || Sbjct 94436 TGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGTATCCCACCGGACCA 94495 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||| || |||||||||||||| || ||| | | | | || || || Sbjct 94496 GCAGCGATTGATATTCGCCGGGAAACAGCTCGAAGATGGCCGTACTCTAGCTGACTACAA 94555 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||||||||| ||||| Sbjct 94556 CATCCAGAAGGAATCGACTCTACA 94579 >seq8379 Length=157374 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| ||||| || || || || || || || | | Sbjct 116082 GATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTTGAGTCATC 116141 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| |||||||||||||| ||||| || || || || || Sbjct 116142 TGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGTATCCCACCGGACCA 116201 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||| || |||||||||||||| || ||| | | | | || || || Sbjct 116202 GCAGCGATTGATATTCGCCGGGAAACAGCTCGAAGATGGCCGTACTCTAGCTGACTACAA 116261 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||||||||| ||||| Sbjct 116262 CATCCAGAAGGAATCGACTCTACA 116285 >seq10330 Length=49715 Score = 114 bits (126), Expect = 1e-20 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || | || ||||| | | Sbjct 15458 ATGCAGATCTTTGTGAAGACACTGACCGGCAAGACCATCACATTGGAGGTAGAGAGCTCT 15399 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 15398 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCGGACCAG 15339 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || ||| | ||||| || || || ||||| |||||| ||| | || || | || || | Sbjct 15338 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCG-CACACTTG-CTGACTACA 15281 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||||| || || || |||||||| Sbjct 15280 ACATTCAAAAGGAGTCAACCCTTCACTTGGT 15250 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| ||||||| || ||||| || || || || || || || ||| | | Sbjct 16143 GATGCAGATCTTCGTTAAAACTCTTACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTC 16084 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| ||| | || |||||| ||||||||||| || ||||| |||| Sbjct 16083 TGACACTATCGACAACGTTAAGGCTAA-GATCCAGGACAAAGAAGGCATTCCTCCAGATC 16025 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | |||||||| || |||||| | ||||| | | || | ||||||| Sbjct 16024 AGCAGAGACTTATCTTTGCTGGAAAACAGTTAGAGGACGGCCGTACTTTGGCTGATTATA 15965 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 | || || || ||||| || || || ||||| Sbjct 15964 ATATCCAGAAAGAATCAACTCTTCATTTGGT 15934 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || | || ||||| || ||||| || || || || | | Sbjct 15686 ATGCAAATATTTGTCAAGACCTTGACTGGTAAGACCATTACCCTTGAGGTGGAGAGCTCT 15627 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| || || ||||| || || || || || Sbjct 15626 GACACCATTGACAACGTGAAAGCCAAGATCCAGGATAAGGAAGGTATCCCACCAGACCAG 15567 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGT-CAGATTAT 24880 || ||| | ||||| || || || ||||| |||||| ||| |||| | || ||| Sbjct 15566 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGC---ACATTAGCTGACTAT 15510 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || ||||| || ||||||||||| ||| | || || || Sbjct 15509 AACATCCAGAAAGAGTCGACCCTTCACTTGGTGTTACGACTCCGTGGTGG 15460 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || |||| || || || ||||| ||||| ||||| | | Sbjct 15914 ATGCAAATCTTCGTTAAGACCTTAACAGGAAAGACGATTACTCTCGAGGTAGAGAGCTCT 15855 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || ||||||||| || || || || || || || || Sbjct 15854 GACACCATCGACAACGTTAAGGCCAA-GATCCAAGATAAGGAGGGTATCCCACCAGACCA 15796 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAA-ACATGTCAGATTATA 24881 || | |||||||| ||||| || || || || ||| ||| || || | ||||| | Sbjct 15795 GCAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGATGGCCGAACACTTG-CTGATTACA 15737 Query 24882 ACATTCAAAAGGAATCGACACTACA-CTTG 24910 |||| || ||||| || ||||| || |||| Sbjct 15736 ACATCCAGAAGGAGTCTACACTTCATCTTG 15707 >seq8798 Length=192640 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || || || || ||||||||||| | || || || | | Sbjct 21097 ATGCAGATCTTTGTTAAGACCCTTACTGGAAAAACTATTACTTTGGAGGTTGAGAGCTCA 21156 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| || ||||| ||||| || || || || || Sbjct 21157 GACACCATTGACAATGTCAAAGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAG 21216 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | |||||||| || || ||||| |||||| | | || | ||||||||| Sbjct 21217 CAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAGGATGGTCGGACTTTGGCTGATTATAAC 21276 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 || || |||||||| || || |||||||| | ||||| Sbjct 21277 ATCCAGAAGGAATCAACCCTTCACTTGGTTCTACGATT 21314 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || ||||| ||||| || || | ||||| || | | Sbjct 21325 ATGCAGATTTTTGTCAAGACCCTTACCGGCAAAACAATCACTTTGGAAGTTGAGAGCTCT 21384 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 21385 GACACTATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 21444 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||||||||| || ||||| |||||| ||||| | | || || ||| Sbjct 21445 CAGAGGCTTATCTTTGCCGGTAAGCAGCTAGAGGATGGGAGAACACTCGCTGACTACAAC 21504 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||| || || || || || || Sbjct 21505 ATTCAAAAGGAGTCCACTCTCCATTTAGT 21533 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| ||||| || || | ||||| || | | Sbjct 20869 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATCACTTTGGAAGTTGAGAGCTCT 20928 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||| ||||| ||||| || ||||||||||| Sbjct 20929 GACACTATTGACAACGTCAAGGCTAAA-ATCCAGGACAAGGAAGGTATCCCTCCCGATCA 20987 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | ||||| ||||| || ||||| || ||| |||| | | || || || Sbjct 20988 GCAGAGGCTTATCTTCGCCGGTAAGCAGCTAGAAGATGGAAGAACACTCGCTGACTACAA 21047 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || || || || || || || |||||| Sbjct 21048 CATCCAGAAAGAGTCCACTCTCCATTTGGTG 21078 Score = 89.7 bits (98), Expect = 5e-13 Identities = 98/127 (77%), Gaps = 4/127 (3%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| ||||| || || || || ||||| | | ||||| || |||||| Sbjct 21637 AAGATTCAGGACAAGGAAGGGATCCCACCGGACCAACAGAGACTCATCTTCGCTGGGAAA 21696 Query 24848 CAGCTGGAGGAT--TCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTAC 24905 ||||| |||||| ||| || | || | ||||| ||||| || ||||||||||| || | Sbjct 21697 CAGCTAGAGGATGGTCG-GACA-TTGGCTGATTACAACATCCAGAAGGAATCGACTCTTC 21754 Query 24906 ACTTGGT 24912 ||||||| Sbjct 21755 ACTTGGT 21761 >seq2888 Length=1483 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| |||||||| || || || || || || ||||| || ||||||||| Sbjct 28 AAGATCCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGATTGATATTCGCCGGGAAA 87 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 |||||||| || | | | | || || ||||| ||||||||||| || || || Sbjct 88 CAGCTGGAAGACGGCCGTACTCTCGCCGACTACAACATCCAAAAGGAATCAACGCTTCAT 147 Query 24908 TTGGTG 24913 ||||| Sbjct 148 CTGGTG 153 >seq8683 Length=130760 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/140 (73%), Gaps = 9/140 (6%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| ||||| |||||||| || ||| || || ||||||| | || | Sbjct 52168 AAAACCCTAACAGGTAAAACCAT---------AGTCGAGTCCTCCGACACTATTGACAAT 52218 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || ||| |||||||||||| || ||||| ||||| || || ||||||||||| || || Sbjct 52219 GTCAAAGCAAAGATCCAAGATAAGGAAGGTATACCACCGGACCAACAACGTTTAATATTC 52278 Query 24839 GCCGGGAAACAGCTGGAGGA 24858 ||||| ||||||| || || Sbjct 52279 GCCGGAGAACAGCTAGAAGA 52298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449831718120200