Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq9882 123 7e-24 >seq9882 Length=79551 Score = 123 bits (136), Expect = 7e-24 Identities = 185/259 (71%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 19965 ATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAAC 20024 ||| |||| || | | |||| |||| |||| || ||| | |||||||| || || | Sbjct 46244 ATGGTATGTCTATAAGAATCTTTGGTATTTTCAGCTTTATGATTGTATTCCAGGCTGAGC 46185 Query 20025 ATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCAC 20084 | ||| |||| || ||||| || |||||| | ||||| |||||||||||| | || || | Sbjct 46184 ACAACTTTCTTATACACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCAGCGGCTCCC 46125 Query 20085 TATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAA 20143 |||| |||| ||||| ||| |||| || | || | ||| | | || || || ||| Sbjct 46124 TATTTAGTG-TATGCATAGTTTTTTTGTAAC-TTCTAGTTTGATCAGGGAAACCACAGAA 46067 Query 20144 CAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTA 20203 | ||| | || | ||||||| || || |||||| || | || || ||| | ||| Sbjct 46066 AATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAAAAATAAACATACAACTTTGTA 46007 Query 20204 GCCGCTCATGGTTACTTTG 20222 || ||||||||||| |||| Sbjct 46006 GCTGCTCATGGTTATTTTG 45988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148808095588470