Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq10149 93.3 3e-14 >seq10149 Length=112605 Score = 93.3 bits (102), Expect = 3e-14 Identities = 129/179 (72%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 118487 TATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAG--CCCTGTCAG 118544 |||| ||||||||||| ||||| |||||| || |||||||| ||| | | | || Sbjct 60901 TATACACATGAGCATCACCAATAACATGTATAAAATCACCAGGAACAAGATCACAGACA- 60843 Query 118545 GTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACC 118604 ||||| | ||| | || | | | ||| || | ||||| || ||||| || || Sbjct 60842 -TGAGCTAACATACAAGTAAGAAGAGAGTAAGAAGCAATGTTAAATGGTACACCAAGTCC 60784 Query 118605 CATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACT 118663 |||||||||||| | || |||| ||| || ||||| || || | |||||||||||||| Sbjct 60783 CATGTCTGCTGAACGTTGATACATTTGACATGAGAGTTCTCCTTCTGCAACATAAAACT 60725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414417622427260