Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq9253 84.2 2e-11 >seq9253 Length=129212 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--A 27844 |||||||| || || |||||||| || || ||||| || ||| | || || ||| | Sbjct 94628 AAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACACTAGAGGTAGAATCA 94687 Query 27845 GCACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 || || || ||||| || ||| || || ||||||||||| | || || Sbjct 94688 TCAGACACAATCGACAAT--GTGAAAGCGAAGATCCAAGACAAAGAAGGAATCCCACCGG 94745 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || || || || || || ||||||||||||||||| |||| | | | |||||| Sbjct 94746 ATCAACAGCGATTGATCTTCGCCGGAAAACAATTGGAAGACGGTAGAACACTCGCCGATT 94805 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 |||||||||| ||||| || | |||||||| Sbjct 94806 ACAACATCCAGAAAGAATCAACGCTTCATTTGGT 94839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355811591189805