Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq8798 91.5 1e-13 >seq8798 Length=192640 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||||||| |||| ||||| || || || || || || || |||||||| || Sbjct 21323 CCACCTCTTAATCGTAGAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTATAATCAGCC 21264 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGG 39176 | || || | || || ||||| || || ||||| ||||| | ||||||||| |||||| Sbjct 21263 AAAGTCCGACCATCCTCTAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 21204 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTC 39233 | || || |||||| || || ||||| | | | || || |||| || Sbjct 21203 ATCCCT-TCCTTGTCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---TC 21148 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| || ||| ||||||| || || || ||||||||||| ||||| Sbjct 21147 AACCTCCAAAGTAATAGTTTTTCCAGTAAGGGTCTTAACAAAGATCTGCAT 21097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429484270955795