Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq9882 111 2e-19 >seq9882 Length=79551 Score = 111 bits (122), Expect = 2e-19 Identities = 156/218 (72%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 169850 ATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTT 169909 ||| | || ||||| |||||||||||| | || || ||||| || |||||| | ||||| Sbjct 46206 ATGATTGTATTCCAGGCTGAGCACAACTTTCTTATACACCCATTTCACATGTTAGGTGTA 46147 Query 169910 GCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGT 169969 || || || || | || || || ||||| | ||||| || | || ||||| ||| Sbjct 46146 GCTGGTGTATTCAGCGGCTCCCTATTTAGTGT-ATGCATAGTTTTTTTGTAACTTCTAGT 46088 Query 169970 CTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAA 170029 | || | |||||||| || || || || || | ||||||| |||||||||||| Sbjct 46087 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACATATTCGGTCAAGAA 46028 Query 170030 GAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTT 170067 || | || |||||| | || || ||||| ||||| || Sbjct 46027 AAATAAACATACAACTTTGTAGCTGCTCATGGTTATTT 45990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592111679946800