Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leavenworthia_20alabamica_20[genbank_20GCA_5F000411055.1_202013-06- 14] 11,715 sequences; 173,431,618 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8726 147 2e-30 seq8634 141 7e-29 seq11021 136 3e-27 seq10330 131 1e-25 seq9990 129 4e-25 seq8641 129 4e-25 seq9253 123 2e-23 seq10212 122 6e-23 seq8848 116 3e-21 seq8379 116 3e-21 seq2888 102 6e-17 seq8798 95.1 9e-15 >seq8726 Length=217380 Score = 147 bits (162), Expect = 2e-30 Identities = 162/213 (76%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||||||||| |||||||||||||||||||| |||||| | |||| || Sbjct 142521 CACCAAGTGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCGAGTGTTCTTCCGTCTTC 142580 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||| ||||| ||||| |||||||| | ||||||||| | || | |||||||| || Sbjct 142581 CAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGTGGGATTCCTTCCTTGTCTTG 142640 Query 44248 TATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 |||||| |||| || ||| | || ||||| | ||||| ||||| | || || || Sbjct 142641 GATCTTC-GCTTTCACATTGT--CGATTGTGTCAGATGATTCAACCTCTAAGGTTATTGT 142697 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||| ||||||||||| ||||| Sbjct 142698 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 142730 >seq8634 Length=210279 Score = 141 bits (156), Expect = 7e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||||||| | | ||||| |||||||| ||||| |||||||||||||||||| Sbjct 12017 CCTCCTCTCAGACGTAGCACCAAATGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCG 12076 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || | |||| || | || || ||||| || ||||| ||||||||||| | || Sbjct 12077 AGAGTCCTTCCGTCTTCTAATTGTTTTCCGGCGAATATCAATCGCTGCTGATCCGGTGGG 12136 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | |||||||| || |||||| |||| || ||| | || ||||||| ||||| Sbjct 12137 ATTCCTTCCTTGTCTTGGATCTTC-GCTTTCACATTGT--CGATTGTGTCGGATGATTCA 12193 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || |||||||| ||||| ||||| ||||||||||| ||||| Sbjct 12194 ACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 12243 >seq11021 Length=502384 Score = 136 bits (150), Expect = 3e-27 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || |||||||| ||||| ||||||||||| || || || || |||| ||| Sbjct 217132 ACGAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCAGCCAGAGTACGGCCGTCTTCC 217073 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || |||||||| || ||||| |||||||| || | || | |||||||| || Sbjct 217072 AGTTGTTTCCCGGCGAATATCAATCGCTGCTGGTCCGGTGGTATTCCTTCCTTGTCTTGA 217013 Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| |||| || ||| | |||||||| | ||| || ||||| | ||||| ||| Sbjct 217012 ATCTTC-GCTTTGACATTGT--CGATGGTGTCAGAGGACTCAACCTCGAGAGTAATAGTC 216956 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| ||||| ||||||||||| ||||| Sbjct 216955 TTTCCCGTTAGGGTTTTCACGAAGATCTGCAT 216924 >seq10330 Length=49715 Score = 131 bits (144), Expect = 1e-25 Identities = 174/238 (73%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || || | || || | || || ||||| || |||||| |||||||| Sbjct 15678 TATTTGCATACCACCACGGAGCCTGAGAACAAGATGAAGTGTAGACTCCTTCTGGATGTT 15737 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 |||||| || ||| || | || || || ||||| ||||| |||||||| | |||||| Sbjct 15738 GTAATCAGCAAGTGTTCGGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTG 15797 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGG 44279 |||| || | ||| ||||| || ||||| || | || ||| | |||||||| | Sbjct 15798 GTCTGGTGGGATACCCTCCTTATCTTGGATCTT-GGCCTTAACGTTGTCGATGGTGTCAG 15856 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||| | |||||||||||||| || | |||||| |||||||||||||| Sbjct 15857 AGCTCTCTACCTCGAGAGTAATCGTCTTTCCTGTTAAGGTCTTAACGAAGATTTGCAT 15914 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| || || || ||||| || ||||| || | || |||| || Sbjct 15934 ACCAAATGAAGAGTTGATTCTTTCTGGATATTATAATCAGCCAAAGTACGGCCGTCCTCT 15993 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||| || || |||||||| | | ||||||||||| ||| | ||||| || ||| Sbjct 15994 AACTGTTTTCCAGCAAAGATAAGTCTCTGCTGATCTGGAGGAATGCCTTCTTTGTCCTGG 16053 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| || | || ||| | || ||||| | | ||||||||| | || || ||||| Sbjct 16054 ATCTT-AGCCTTAACGTTGTCGATAGTGTCAGAGCTTTCCACCTCAAGGGTGATGGTCTT 16112 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || || || |||||||| ||||| Sbjct 16113 TCCGGTAAGAGTTTTAACGAAGATCTGCAT 16142 >seq9990 Length=160576 Score = 129 bits (142), Expect = 4e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || || | || || ||||| || |||||| ||||||||||| Sbjct 159645 TTGCATACCACCTCGGAGCCTTAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTA 159704 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || || | ||| |||| || |||||||| ||||| ||||| | | ||||||||| Sbjct 159705 GTCAGCCAAAGTACGCCCGTCCTCTAGCTGCTTTCCGGCGAAGATTAGCCTCTGCTGATC 159764 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 | ||| | ||| ||||| ||| || || || | || ||| | |||||||| | | Sbjct 159765 CGGAGGAATACCCTCCTTATCCTGGAT-TTTGGCCTTAACGTTGTCGATGGTGTCAGAGC 159823 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | ||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 159824 TCTCCACCTCAAGAGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATTTGCAT 159878 Score = 125 bits (138), Expect = 5e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | || | ||| |||| |||||| || |||||| || || ||||| Sbjct 159189 TTGCATACCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATATTGTA 159248 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||| | || | || || |||||||| |||||||||||||| | |||||| || Sbjct 159249 ATCGGCCAAGGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTC 159308 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | ||| || || || || || ||||| | | |||||||||| | Sbjct 159309 CGGTGGAATACCCTCTTTGTCTTGGATTTTGGCCTTCACGTTGTCAATGGTGTCGGAGCT 159368 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | |||||| ||||| || || | |||||||||||||||||||| Sbjct 159369 CTCCACCTCGAGCGTAATGGTCTTACCAGTCAAAGTCTTCACGAAGATTTGCAT 159422 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| |||| |||||| || |||||| || || |||||||| Sbjct 158964 CATACCTCCACGAAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAATC 159023 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | || | || || |||||||| || || ||||| | ||||||||| |||| Sbjct 159024 AGCCAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGG 159083 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| || ||||| |||| | ||| | |||||||||| | | Sbjct 159084 TGGGATGCCTTCCTTATCTTGGATCTTG-GCTTTCACGTTGTCGATGGTGTCGGAGCTCT 159142 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | ||||| ||||| || || | ||||||||||||||||||||| Sbjct 159143 CCACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 159194 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| ||||||||||| || || || || | || || Sbjct 158758 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGACCATCCTCG 158817 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || || ||||| | ||||||||| |||| ||| | |||||| || ||| Sbjct 158818 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGG 158877 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||| | | ||| || || | || || ||||| Sbjct 158878 ATCTTGGCCTTCACGTTGTCAATTGTGTCAGAGCTTTCGACTTCAAGGGTTATAGTCTTG 158937 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||||||||||||| ||||| Sbjct 158938 CCGGTAAGTGTCTTCACGAAGATCTGCAT 158966 >seq8641 Length=178042 Score = 129 bits (142), Expect = 4e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || || | || || ||||| || |||||| ||||||||||| Sbjct 932 TTGCATACCACCTCGGAGCCTTAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTA 873 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || || | ||| |||| || |||||||| ||||| ||||| | | ||||||||| Sbjct 872 GTCAGCCAAAGTACGCCCGTCCTCTAGCTGCTTTCCGGCGAAGATTAGCCTCTGCTGATC 813 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282 | ||| | ||| ||||| ||| || || || | || ||| | |||||||| | | Sbjct 812 CGGAGGAATACCCTCCTTATCCTGGAT-TTTGGCCTTAACGTTGTCGATGGTGTCAGAGC 754 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | ||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 753 TCTCCACCTCAAGAGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATTTGCAT 699 Score = 125 bits (138), Expect = 5e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | || | ||| |||| |||||| || |||||| || || ||||| Sbjct 1388 TTGCATACCTCCACGAAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGAATATTGTA 1329 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||| | || | || || |||||||| |||||||||||||| | |||||| || Sbjct 1328 ATCGGCCAAGGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTC 1269 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | ||| || || || || || ||||| | | |||||||||| | Sbjct 1268 CGGTGGAATACCCTCTTTGTCTTGGATTTTGGCCTTCACGTTGTCAATGGTGTCGGAGCT 1209 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | |||||| ||||| || || | |||||||||||||||||||| Sbjct 1208 CTCCACCTCGAGCGTAATGGTCTTACCAGTCAAAGTCTTCACGAAGATTTGCAT 1155 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | ||| |||| |||||| || |||||| || || |||||||| Sbjct 1613 CATACCTCCACGAAGACGCAAGACCAAGTGAAGAGTCGACTCCTTCTGAATATTGTAATC 1554 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | || | || || |||||||| || || ||||| | ||||||||| |||| Sbjct 1553 AGCCAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGG 1494 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| || ||||| |||| | ||| | |||||||||| | | Sbjct 1493 TGGGATGCCTTCCTTATCTTGGATCTTG-GCTTTCACGTTGTCGATGGTGTCGGAGCTCT 1435 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | ||||| ||||| || || | ||||||||||||||||||||| Sbjct 1434 CCACCTCGAGGGTAATGGTCTTACCAGTCAAGGTCTTCACGAAGATTTGCAT 1383 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| ||||||||||| || || || || | || || Sbjct 1819 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGACCATCCTCG 1760 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || || ||||| | ||||||||| |||| ||| | |||||| || ||| Sbjct 1759 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGG 1700 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||| | | ||| || || | || || ||||| Sbjct 1699 ATCTTGGCCTTCACGTTGTCAATTGTGTCAGAGCTTTCGACTTCAAGGGTTATAGTCTTG 1640 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||||||||||||| ||||| Sbjct 1639 CCGGTAAGTGTCTTCACGAAGATCTGCAT 1611 >seq9253 Length=129212 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| || | | |||| |||||||| || || |||||||||||||||||| Sbjct 94857 CCTCCTCTTAGACGGAGTACCAAATGAAGCGTTGATTCTTTCTGGATGTTGTAATCGGCG 94798 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| | |||| |||| || || ||||| |||||||| ||||| ||||| | || Sbjct 94797 AGTGTTCTACCGTCTTCCAATTGTTTTCCGGCGAAGATCAATCGCTGTTGATCCGGTGGG 94738 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||||| || || |||||| |||| || ||| | || ||||| | ||||| Sbjct 94737 ATTCCTTCTTTGTCTTGGATCTTC-GCTTTCACATTGT--CGATTGTGTCTGATGATTCT 94681 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| ||||| ||||| ||||||||||| ||||| Sbjct 94680 ACCTCTAGTGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 94631 >seq10212 Length=148016 Score = 122 bits (134), Expect = 6e-23 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||||| ||||| ||||||||||| || ||||| || |||| || Sbjct 127818 ACCAAATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCAGCGAGAGTACGGCCGTCTTCA 127759 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| |||||||| || |||||||| |||||||| | || | |||||||| || Sbjct 127758 AGCTGTTTCCCGGCGAAAATCAAACGTTGCTGATCCGGTGGGATGCCTTCCTTGTCTTGG 127699 Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| |||| || ||| | |||||||| | ||| || ||||| | || || || Sbjct 127698 ATCTT-AGCTTTCACATTGT--CGATGGTGTCAGAGGACTCAACCTCAAGTGTGATTGTT 127642 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| || |||||||| ||||| Sbjct 127641 TTACCCGTTAGGGTTTTGACGAAGATCTGCAT 127610 >seq8848 Length=112532 Score = 116 bits (128), Expect = 3e-21 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| || || || || | || || ||||| |||||||| || Sbjct 94567 TCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCGAGCTGTTTCCCGGCGAAT 94508 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAAT 44263 ||||| |||||||| || | || | ||||||||| || |||||| |||| || | Sbjct 94507 ATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTC-GCTTTGACATT 94449 Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | |||||||| | || || ||||| | || || ||||| ||||| ||||| ||| Sbjct 94448 GT--CGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTC 94391 Query 44324 ACGAAGATTTGCAT 44337 |||||||| ||||| Sbjct 94390 ACGAAGATCTGCAT 94377 >seq8379 Length=157374 Score = 116 bits (128), Expect = 3e-21 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| || || || || | || || ||||| |||||||| || Sbjct 116273 TCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCCATCTTCGAGCTGTTTCCCGGCGAAT 116214 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAAT 44263 ||||| |||||||| || | || | ||||||||| || |||||| |||| || | Sbjct 116213 ATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTC-GCTTTGACATT 116155 Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | |||||||| | || || ||||| | || || ||||| ||||| ||||| ||| Sbjct 116154 GT--CGATGGTGTCAGATGACTCAACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTC 116097 Query 44324 ACGAAGATTTGCAT 44337 |||||||| ||||| Sbjct 116096 ACGAAGATCTGCAT 116083 >seq2888 Length=1483 Score = 102 bits (112), Expect = 6e-17 Identities = 116/153 (76%), Gaps = 6/153 (4%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||| |||||||| ||||||||||||||||| |||||||| || |||| || Sbjct 153 CACCAGATGAAGCGTTGATTCCTTTTGGATGTTGTAGTCGGCGAGAGTACGGCCGTCTTC 94 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| |||||||| || ||||| |||||||| || | || | |||||||| || Sbjct 93 CAGCTGTTTCCCGGCGAATATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTG 34 Query 44248 TATCTTCTGCTT---CAATGTTCCTATGGTGTC 44277 |||||| |||| || ||| | |||||||| Sbjct 33 GATCTTC-GCTTTGACATTGT--CGATGGTGTC 4 >seq8798 Length=192640 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| || || ||| ||| || ||||||||||| || |||||| | | || || Sbjct 21078 CACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGCGAGTGTTCTTCCATCTTC 21019 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | | ||||||||| | ||| | ||||||||| ||| Sbjct 21018 TAGCTGCTTACCGGCGAAGATAAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCCTG 20959 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || ||| | | | || ||||| | | || || |||| || || || || Sbjct 20958 GATTTTAGCCTTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCCAAAGTGATGGTTTT 20899 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||| ||||| Sbjct 20898 GCCGGTAAGGGTCTTGACAAAGATCTGCAT 20869 Score = 95.1 bits (104), Expect = 9e-15 Identities = 164/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || ||||| || | | || | || || ||| ||||||||| ||||| Sbjct 21561 TATTTGCATACCACCTCTGAGACGAAGTACTAAATGGAGAGTGGACTCCTTTTGAATGTT 21502 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || |||||| | | | || || |||||||| ||||||||||| | | |||||| Sbjct 21501 GTAGTCAGCGAGTGTTCTCCCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTG 21442 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 || | || | |||||||| ||| ||||| ||| | | | || ||||| | Sbjct 21441 GTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCAGA 21382 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||| || || || || || || |||||||| || || || ||||| Sbjct 21381 GCTCTCAACTTCCAAAGTGATTGTTTTGCCGGTAAGGGTCTTGACAAAAATCTGCAT 21325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359939001808155