Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22] 48,397 sequences; 282,201,865 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq9568 84.2 2e-11 seq30174 82.4 6e-11 >seq9568 Length=20649 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||| |||| | || | ||| ||||||||| || ||||| || | Sbjct 4522 ACATGAGCAATCATGTAAGTCAGGAGTGCATAAGAAGCAATGTTGAAAGGCACACCGAGG 4581 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 ||||||||||| || | ||||||| |||||| || |||| |||| Sbjct 4582 CCCATATCAGCGGACCGCTGATACATTTGACACGACAGCTCCCCAT 4627 >seq30174 Length=20574 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 |||||||||||||||||||| | || | ||| ||||||||| || ||||| || | Sbjct 15259 ACATGAGCAATCATGCAAGTCAGGAGTGCATAAGAAGCAATGTTGAAAGGCACACCAAGG 15200 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCT 101855 ||||||||||| || | ||||||| ||| || || |||| Sbjct 15199 CCCATATCAGCGGACCGCTGATACATTTGGCACGACAGCT 15160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361038120156647