Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq9568 84.2 2e-11
seq30174 82.4 6e-11
>seq9568
Length=20649
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815
||||||||||||||| |||| | || | ||| ||||||||| || ||||| || |
Sbjct 4522 ACATGAGCAATCATGTAAGTCAGGAGTGCATAAGAAGCAATGTTGAAAGGCACACCGAGG 4581
Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861
||||||||||| || | ||||||| |||||| || |||| ||||
Sbjct 4582 CCCATATCAGCGGACCGCTGATACATTTGACACGACAGCTCCCCAT 4627
>seq30174
Length=20574
Score = 82.4 bits (90), Expect = 6e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815
|||||||||||||||||||| | || | ||| ||||||||| || ||||| || |
Sbjct 15259 ACATGAGCAATCATGCAAGTCAGGAGTGCATAAGAAGCAATGTTGAAAGGCACACCAAGG 15200
Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCT 101855
||||||||||| || | ||||||| ||| || || ||||
Sbjct 15199 CCCATATCAGCGGACCGCTGATACATTTGGCACGACAGCT 15160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361038120156647
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |