Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq9568 118 8e-22
seq30174 100 2e-16
>seq9568
Length=20649
Score = 118 bits (130), Expect = 8e-22
Identities = 100/123 (81%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490
|| |||||||| || ||| || ||||||||||||||||||| || ||||||||||||
Sbjct 4643 CAGTTTTACGTGGCGAATGGGGAGCTGTCGTGTCAAATGTATCAGCGGTCCGCTGATATG 4584
Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550
|| || ||||| |||||||| ||||| |||||| || || || || |||||||| |||
Sbjct 4583 GGCCTCGGTGTGCCTTTCAACATTGCTTCTTATGCACTCCTGACTTACATGATTGCTCAT 4524
Query 20551 GTT 20553
|||
Sbjct 4523 GTT 4521
>seq30174
Length=20574
Score = 100 bits (110), Expect = 2e-16
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTG 20515
||||||| ||||||||||| || |||||||||||||| || ||||| |||||||| ||||
Sbjct 15163 TGTCGTGCCAAATGTATCAGCGGTCCGCTGATATGGGCCTTGGTGTGCCTTTCAACATTG 15222
Query 20516 CAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553
| |||||| || || || | |||||||| ||||||
Sbjct 15223 CTTCTTATGCACTCCTGACTTGCATGATTGCTCATGTT 15260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398948545933165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |