Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22] 48,397 sequences; 282,201,865 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq45547 82.4 6e-11 >seq45547 Length=474 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||| || || || || || || || || || | || || ||| | Sbjct 438 ATGCAAATCTTTGTAAAGACTTTCACTGGAAAGACTATCACTCTGGAAGTGGAAAGCTCC 379 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | | | |||||||||||| | || || || || || |||||| Sbjct 378 GACACCCTTGATAATATGAAGGAAAAAATTCAGGACAAGGAGGGGGTCCCTCCGGACCAG 319 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||| | | |||| ||| || || || || |||||| || |||| | ||||||| | Sbjct 318 CAAAGGCTGATATTTGCAGGGAAGCAGCTTGAAGATGGCAGGACTCTTGTTGATTACAAC 259 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 |||||||| || |||| |||||||| || | || |||| || ||| Sbjct 258 ATACAGAAGGAATCCACTCTTCATTTGGTCCTTCGTCTGCGTGGTGGT 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418057268222240