Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq5564 82.4 5e-11
>seq5564
Length=26244
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 43919 TGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGT 43978
|| || ||| ||| |||||||| ||||| || | | || |||| |||| |||
Sbjct 5547 TGCAGAGTGGACTCCTTTTGAATGTTATAGTCAGCAAGTGTGCGTCCATCTTCCAGTTGC 5488
Query 43979 TTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTT 44038
|| |||||||| || | || |||||||| | || | ||| ||||| ||| |||||
Sbjct 5487 TTCCCTGCAAAGATTAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATTTTA 5428
Query 44039 TGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTT 44098
||| || | ||| || || | |||||| || | || || ||||| || ||
Sbjct 5427 GCTTTCACATTGTCAATCGTGTCCGAGTTCTCCACCTCCAGGGTGATGGTTTTTCCTGTC 5368
Query 44099 AAAGTCTTCACAAATATTTGCAT 44121
|||||||||||||| || |||||
Sbjct 5367 AAAGTCTTCACAAAAATCTGCAT 5345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354568338534756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |