Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq9952 152 1e-31
seq5564 152 1e-31
seq25669 150 4e-31
seq247 150 4e-31
seq37694 141 2e-28
seq14506 132 1e-25
seq9418 127 5e-24
seq756 120 7e-22
seq44841 116 9e-21
seq6888 116 9e-21
seq19360 109 1e-18
seq8519 109 1e-18
seq33807 105 2e-17
seq884 98.7 2e-15
seq16130 95.1 3e-14
>seq9952
Length=36685
Score = 152 bits (168), Expect = 1e-31
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| |||||||| |||| || |||| ||||| || || || || |||
Sbjct 3033 GTCGATTCCTTCTGGATATTATAATCAGCGAGGGTTCGTCCGTCCTCCAGCTGCTTCCCA 3092
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || ||||||||||| ||||||||||| || ||||| |||||||||||||| || ||
Sbjct 3093 GCGAAGATTAGCCTCTGCTGATCAGGAGGAATCCCTTCCTTATCCTGAATCTTCGCCTTC 3152
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||||| | || ||||| || ||||| |||||||| || | ||
Sbjct 3153 ACGTTGTCAATCGTATCCGAACTCTCCACCTCCAGCGTAATCGTCTTACCTGTCAAGGTC 3212
Query 104543 TTTACAAATATCTGCAT 104559
|| || |||||||||||
Sbjct 3213 TTCACGAATATCTGCAT 3229
Score = 113 bits (124), Expect = 1e-19
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| ||||||||||| | || || || ||||| ||||| ||||| | ||| || |
Sbjct 3468 AGCCTTAGTACTAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCGGCTAGGGTACGG 3527
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || || || || ||||| | | ||| ||||| ||||| || |||||
Sbjct 3528 CCATCCTCGAGCTGCTTGCCCGCGAAAATCAATCGCTGCTGATCCGGAGGAATACCTTCC 3587
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520
|| ||||| ||||| || || || || || | || || || | || ||||| || ||
Sbjct 3588 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTC-AGAGCTCTCGACCTCAAGGGT 3646
Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || || || || || || || ||||||||
Sbjct 3647 GATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3685
>seq5564
Length=26244
Score = 152 bits (168), Expect = 1e-31
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || |||| ||| || | ||| | || || || |||||||| ||||||||
Sbjct 4890 ATACCACCCCTGAGCCGAAGGACCAAATGAAGGGTTGACTCCTTCTGAATGTTATAGTCT 4831
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | ||||| || || || || || ||||||||||| || | |||||| ||||| ||
Sbjct 4830 GCCAAGGTTCTCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGG 4771
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508
|| ||||| || || || || ||||||||||| ||||| || | || ||| || | ||
Sbjct 4770 GGAATTCCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCAATCGTGTCG-GAGCTCTC 4712
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| |||||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 4711 AACCTCAAGTGTAATTGTCTTTCCAGTTAGGGTCTTCACAAAGATCTGCAT 4661
Score = 134 bits (148), Expect = 3e-26
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || |||||||||| || |||| || || ||||| || ||||||
Sbjct 4629 GTGGACTCCTTCTGGATGTTATAGTCAGCCAGGGTTCGGCCATCCTCTAGCTGCTTTCCA 4570
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | |||||| ||||| ||||| || || || || || ||||||||||||||
Sbjct 4569 GCAAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTTTGCTTTC 4510
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | || || || | || ||||| ||||| || ||||| || || | ||
Sbjct 4509 ACATTGTCGATCGTGTC-AGAGCTCTCAACCTCAAGTGTGATTGTCTTTCCGGTCAAGGT 4451
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 4450 CTTGACAAAGATCTGCAT 4433
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | || || | ||| | || || |||||||| || || |||||
Sbjct 5346 ATACCTCCTCGCAGACGCAGGACCAAATGGAGGGTTGACTCTTTCTGGATGTTGTAGTCT 5287
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | ||| || || || || || || || || |||||||| | |||||| ||||| ||
Sbjct 5286 GCCAAAGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAAATCAACCTCTGCTGATCCGGG 5227
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || || ||||||||||| || ||||| || | |||||| | ||
Sbjct 5226 GGAATACCCTCCTTGTCTTGAATCTTTGCCTTCACATTGTCAATGGTATCTGAACTCTCG 5167
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||||| ||||| ||||| ||||| || || || || |||||
Sbjct 5166 ACCTCCAAAGTAATGGTCTTCCCAGTCAGTGTCTTCACGAAGATTTGCAT 5117
Score = 113 bits (124), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || || ||||| |||||||||| || || | || ||
Sbjct 5557 AAGGACAAGGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCAGCAAGTGTGCGTCCATC 5498
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| ||||| || || ||||| ||||||||||| || || || || || || ||||| ||
Sbjct 5497 TTCCAGTTGCTTCCCTGCAAAGATTAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC 5438
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
|| || || ||||| ||||| || | || || | || | || ||||| || || || |
Sbjct 5437 TTGGATTTTAGCTTTCACATTGTCAATCGTGTC-CGAGTTCTCCACCTCCAGGGTGATGG 5379
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| || || || | || || ||||| ||||||||
Sbjct 5378 TTTTTCCTGTCAAAGTCTTCACAAAAATCTGCAT 5345
>seq25669
Length=30460
Score = 150 bits (166), Expect = 4e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| ||||||||||| | || ||||| ||||| ||||| || || | ||| || |
Sbjct 8764 AGCCTCAGTACTAGATGGAGAGTTGATTCCTTCTGGATATTGTAATCCGCTAGGGTACGG 8705
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || || || || || || ||||| | | ||| ||||| ||||| ||||||||
Sbjct 8704 CCATCCTCGAGCTGCTTCCCCGCGAAAATCAATCGCTGCTGATCCGGAGGAATTCCTTCC 8645
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|| ||||| ||||| || || ||||| || | |||||| | || ||||| || |||
Sbjct 8644 TTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTATCGGAACTCTCAACCTCGAGAGTA 8585
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| ||||| |||||||| || || ||||||||
Sbjct 8584 ATCGTCTTCCCAGTCAGTGTTTTGACGAAGATCTGCAT 8547
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| |||||||| |||| || |||| ||||| || || || || ||
Sbjct 839 GTCGACTCCTTCTGGATATTATAATCAGCGAGGGTTCGTCCGTCCTCCAGCTGCTTCCCT 898
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || ||||||||||| ||||||||||| || ||||| |||||||||||||| || ||
Sbjct 899 GCGAAGATTAGCCTCTGCTGATCAGGAGGAATCCCTTCCTTATCCTGAATCTTCGCCTTC 958
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||||| | || ||||| || ||||| ||||| || || | ||
Sbjct 959 ACGTTGTCAATCGTATCCGAACTCTCCACCTCCAGCGTAATCGTCTTCCCTGTCAACGTC 1018
Query 104543 TTTACAAATATCTGCAT 104559
|| || |||||||||||
Sbjct 1019 TTCACGAATATCTGCAT 1035
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| |||||||| ||||| || |||| ||||| || || || || |
Sbjct 9199 GTCGACTCCTTCTGGATATTATAATCAGAGAGGGTTCGTCCGTCCTCCAGCTGCTTCCGT 9140
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || ||||||||||| ||||||||||| || ||||| ||||||||| |||| || ||
Sbjct 9139 GCGAAGATTAGCCTCTGCTGATCAGGAGGAATCCCTTCCTTATCCTGATTCTTCGCCTTC 9080
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||||| | ||||| || || ||||| ||||| || || | ||
Sbjct 9079 ACGTTGTCAATCGTATCCGAACTCTCTACTTCCAGAGTAATCGTCTTCCCTGTTAACGTC 9020
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 9019 TTCACGAAAATCTGCAT 9003
Score = 113 bits (124), Expect = 1e-19
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| || | || || || || | || || || ||||||||||| || ||
Sbjct 1034 ATCCCTCCTCGGAGACGCAGGACCAGGTGGAGCGTCGACTCCTTCTGAATATTGTAATCC 1093
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | || |||||||| || || || || || || |||||||| || || |||
Sbjct 1094 GCAAGCGTACGTCCATCTTCTAGCTGCTTGCCGGCGAAGATAAGCCTCTGCTGGTCCGGA 1153
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| |||||||| ||||| || || || || || | ||||| | ||
Sbjct 1154 GGAATACCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCAGAACTCTCG 1213
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || ||||| || || || || || ||||| ||||||||
Sbjct 1214 ACTTCCAGAGTTATCGTCTTCCCGGTTAGCGTCTTCACAAAGATCTGCAT 1263
>seq247
Length=47399
Score = 150 bits (166), Expect = 4e-31
Identities = 174/233 (75%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | ||| || ||||| ||||| ||||||||||| || |||||||||
Sbjct 33880 ATCCCACCCCTGAGTCGAAGGACCAGATGCAATGTGGATTCTTTCTGGATGTTATAGTCA 33939
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || |||| || ||||| || || || |||||||| || |||||||| || |||||
Sbjct 33940 GCCAGGGTTCGGCCATCTTCAAGCTGCTTCCCAGCAAATATCAGCCTCTGCTGGTCAGGT 33999
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506
|| || || || || |||||||| || ||||| || || || | ||| || ||| |
Sbjct 34000 GGGATACCCTCCTTGTCCTGAATTTTGGCTTTAACGTTGTCGATGGTGTCTGAGCT---T 34056
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| | || || ||||| || || || || || ||||| ||||||||
Sbjct 34057 TCAACCTCCAAGGTGATTGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 34109
Score = 147 bits (162), Expect = 5e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | ||| | || || | ||| | || || || || || |||||||||||
Sbjct 33424 ATTCCACCCCGTAGACGGAGAACCAAATGGAGAGTCGACTCCTTTTGGATATTATAGTCT 33483
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | ||| ||||| ||||| || |||||||| || ||||| || || || |||
Sbjct 33484 GCAAGGGTCCGACCATCTTCAAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGGTCCGGA 33543
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||| || || |||||||| ||||| || || || || | ||| ||| ||||
Sbjct 33544 GGGATTCCCTCCTTGTCCTGAATTTTTGCCTTCACGTTATCAATGGTGTCGGAGCTTTCT 33603
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || || || ||||| ||||| || ||||||||||| || ||||||
Sbjct 33604 ACTTCCAGAGTGATGGTCTTTCCAGTGAGAGTTTTTACAAAGATTTGCATT 33654
Score = 134 bits (148), Expect = 3e-26
Identities = 169/231 (73%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | || || | ||| | || || || || ||||||||||||||
Sbjct 33197 ATTCCACCTCGCAGACGGAGAACCAAATGGAGAGTCGACTCCTTTTGAATATTATAGTCC 33256
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | ||| ||||| || || || || ||||| || ||||| || ||||||||
Sbjct 33257 GCAAGGGTCCGACCATCTTCCAGCTGCTTCCCTGCAAATATCAGCCTTTGCCGATCAGGA 33316
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||| || || || ||||| ||||| || | || || | ||
Sbjct 33317 GGAATCCCTTCCTTATCTTG-ATTTTGGCTTTCACATTGTCGATTGTGTCAGAACTCTCC 33375
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||||| | ||||| ||||| |||||||| || || || ||||||||||||
Sbjct 33376 ACCTCCAAAGTAATGGTCTTGCCAGTAAGGGTCTTCACGAATATCTGCATT 33426
Score = 127 bits (140), Expect = 5e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | ||| || ||||| || || || || || || || || || ||
Sbjct 33652 ATTCCACCGCGAAGACGAAGCACCAGATGCAAGGTGGACTCCTTTTGGATGTTGTAATCG 33711
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || || | |||||||||| |||||| || ||||| || ||||| || || |||||
Sbjct 33712 GCAAGGGTACGGCCGTCTTCTAATTGTTTGCCCGCAAAGATGAGCCTTTGCTGGTCAGGC 33771
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || ||||||||||| ||||| || || || | ||| || | |||
Sbjct 33772 GGGATGCCCTCCTTGTCCTGAATCTTAGCTTTAACGTTGTCGATGGTGTCCGAACTTTCA 33831
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || ||||| || || || || || || |||||||||||
Sbjct 33832 ACCTCCAAGGTGATTGTCTTGCCGGTGAGAGTCTTGACGAATATCTGCAT 33881
Score = 107 bits (118), Expect = 4e-18
Identities = 135/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || ||||||||||| ||||| || | ||||| | ||||||
Sbjct 32769 AAGAACAAGGTGCAGAGTGGACTCTTTCTGAATGTTATAATCCGCCAGAGTCCGACCGTC 32828
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| ||||| || || ||||| || ||||| || || || ||||| || ||||| || ||
Sbjct 32829 TTCCAGTTGCTTGCCTGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATCCCTTCCTTGTC 32888
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||| ||||| || || | ||| || | ||| || | || | || || || || || || |
Sbjct 32889 CTGTATCTTCGCCTTCAAATTATCAATGGTGTC-CGAGCTCTCCACTTCAAGAGTGATTG 32947
Query 104526 TCT 104528
|||
Sbjct 32948 TCT 32950
>seq37694
Length=247
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || || ||||||||||| | || || | ||| ||||| ||||| || |||
Sbjct 15 GTCGACTCCTTTTGGATATTATAGTCTGCAAGGGTCCGACCATCTTCAAGTTGCTTGCCA 74
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || ||||| || || || ||||| ||||| || || |||||||| ||||| ||
Sbjct 75 GCAAAGATCAGCCTTTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGAATTTTTGCCTTC 134
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||| |||||| || || || || ||||| ||||| || |||
Sbjct 135 ACGTTATCAATGGTGTCGGAGCTTTCTACTTCCAGAGTGATGGTCTTTCCAGTGAGAGTT 194
Query 104543 TTTACAAATATCTGCATT 104560
|||||||| || ||||||
Sbjct 195 TTTACAAAGATTTGCATT 212
>seq14506
Length=85774
Score = 132 bits (146), Expect = 1e-25
Identities = 150/200 (75%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || ||||||| || || | || || ||||| || ||||||
Sbjct 52889 GTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGCCCATCCTCTAGCTGCTTTCCA 52948
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | |||||| || ||||| || || ||||| |||||||| ||||| || ||
Sbjct 52949 GCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCTTCCTTATCCTGTATCTTAGCCTTC 53008
Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539
||||| || | ||| || ||| ||| ||||| || || || ||||| || || ||
Sbjct 53009 ACATTATCAATGGTGTCAGAGCT---TTCCACCTCAAGGGTTATTGTCTTTCCGGTGAGA 53065
Query 104540 GTTTTTACAAATATCTGCAT 104559
||||| || || || |||||
Sbjct 53066 GTTTTCACGAAAATTTGCAT 53085
Score = 104 bits (114), Expect = 5e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || ||||| ||||||||||| | ||||| | || ||
Sbjct 51961 AAGGACAAGGTGCAGAGTCGACTCCTTCTGGATATTATAGTCCGCAAGAGTGCGTCCATC 52020
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| | || || || |||||||| | |||||||| || || || || || || || ||
Sbjct 52021 TTCCAACTGCTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGCGGGATACCCTCCTTGTC 52080
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||||| || || || || || || | || || | || | || ||||| | || || |
Sbjct 52081 TTGAATTTTAGCCTTCACGTTGTCAATTGTGTC-CGAGCTCTCCACCTCCAAAGTTATTG 52139
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| || ||||| | ||| || ||||||||||||||
Sbjct 52140 TTTTCCCAGTCAATGTCTTCACAAATATCTGCAT 52173
>seq9418
Length=21897
Score = 127 bits (140), Expect = 5e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || ||||| || || ||||| | ||||| || ||||||||||| || ||
Sbjct 11097 ATACCTCCCCTGAGCCTGAGCACAAGATGCAGGGTAGACTCCTTCTGAATATTGTAATCG 11038
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || | ||||| || || || ||||| || || || | |||||| ||||| |||
Sbjct 11037 GCCAAGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGA 10978
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || || || || | ||| ||||| ||
Sbjct 10977 GGGATCCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCG 10918
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||||| ||||| ||||| | || || || || ||||||||
Sbjct 10917 ACTTCCAAAGTAATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 10868
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || | ||| || || ||||| | ||||| || ||||||||||| || ||
Sbjct 11553 ATACCTCCCCTCAACCTTAGGACGAGATGGAGGGTAGACTCCTTCTGAATATTGTAATCG 11494
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| | || | ||||| || || || ||||| || || || |||||||| || || ||
Sbjct 11493 GCCAATGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCCGGT 11434
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||| || || ||||| ||||| || || || || || | || || || ||
Sbjct 11433 GGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATTGTGTCACTGCTCTCC 11374
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | || || ||||| || || || || || || || ||||||||
Sbjct 11373 ACCTCCAAAGTGATGGTCTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 11324
>seq756
Length=57245
Score = 120 bits (132), Expect = 7e-22
Identities = 124/161 (77%), Gaps = 6/161 (4%)
Strand=Plus/Plus
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
||||| ||||| ||||||||||||||||| | |||||| || ||||| || || |||||
Sbjct 51031 CCGTCCTCTAGCTGTTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGGGGGATGCCTTCC 51090
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518
|| ||||| ||||| || || ||||| || | ||| || ||| ||| ||||| ||
Sbjct 51091 TTGTCCTGTATCTTAGCCTTGACATTATCAATGGTGTCAGAGCT---TTCCACCTCAAGG 51147
Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || |||||||| || || ||||| || || || |||||
Sbjct 51148 GTGATTGTCTTACCGGTGAGAGTTTTCACGAAAATTTGCAT 51188
Score = 118 bits (130), Expect = 2e-21
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || || ||||| || ||||| ||||||||||| | ||||| | || ||
Sbjct 50480 AAGGACAAGGTGCAAAGTAGACTCCTTCTGGATATTATAGTCCGCAAGAGTACGTCCATC 50539
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| | || || || |||||||| | |||||||| || || || || || || || ||
Sbjct 50540 TTCCAACTGCTTCCCTGCAAAAATCAATCTCTGTTGGTCTGGCGGGATACCCTCCTTGTC 50599
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525
||||| || ||||| || || || | || || | || | || ||||| | || || |
Sbjct 50600 TTGAATTTTAGCTTTCACGTTGTCAATTGTGTC-CGAGCTCTCCACCTCCAAGGTTATTG 50658
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| || ||||| | ||| || ||||||||||||||
Sbjct 50659 TTTTCCCAGTCAATGTCTTCACAAATATCTGCAT 50692
>seq44841
Length=436
Score = 116 bits (128), Expect = 9e-21
Identities = 147/198 (74%), Gaps = 3/198 (2%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||||||||| ||||| || | ||||| | ||||||||| || || || ||
Sbjct 433 GTGGACTCTTTCTGAATGTTATAATCTGCCAGAGTCCGACCGTCTTCCAGCTGCTTGCCC 374
Query 104423 GCAAAA-ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
|||||| || |||||||| || || ||||| || ||||| || |||| ||||| || |
Sbjct 373 GCAAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCTTCCTTGCCCTGTATCTTCGCCGT 314
Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540
||||| || | ||| || | || | || || || || || || | ||| | ||||| |
Sbjct 313 CACATTATCAATGGTGTC-CGAGCTCTCCACTTCAAGAGTGATGGCCTTCCATGTAAGCG 255
Query 104541 TTTTTACAAATATCTGCA 104558
| || ||||| |||||||
Sbjct 254 TCTTCACAAAAATCTGCA 237
>seq6888
Length=12617
Score = 116 bits (128), Expect = 9e-21
Identities = 147/198 (74%), Gaps = 3/198 (2%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||||||||| ||||| || | ||||| | ||||||||| || || || ||
Sbjct 6699 GTGGACTCTTTCTGAATGTTATAATCTGCCAGAGTCCGACCGTCTTCCAGCTGCTTGCCC 6758
Query 104423 GCAAAA-ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481
|||||| || |||||||| || || ||||| || ||||| || |||| ||||| || |
Sbjct 6759 GCAAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCTTCCTTGCCCTGTATCTTCGCCGT 6818
Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540
||||| || | ||| || | || | || || || || || || | ||| | ||||| |
Sbjct 6819 CACATTATCAATGGTGTC-CGAGCTCTCCACTTCAAGAGTGATGGCCTTCCATGTAAGCG 6877
Query 104541 TTTTTACAAATATCTGCA 104558
| || ||||| |||||||
Sbjct 6878 TCTTCACAAAAATCTGCA 6895
Score = 114 bits (126), Expect = 3e-20
Identities = 176/250 (70%), Gaps = 1/250 (0%)
Strand=Plus/Plus
Query 104310 AGTCTTTCCATACTTTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATT 104369
||||||| || | || | ||||| || | || | ||| || ||||| || || || |
Sbjct 7190 AGTCTTTACAAAGATT-TGCATTCCACCACGAAGACGAAGCACCAGATGCAAGGTGGACT 7248
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
| || | || || | || | || || | |||||||||| |||||| || ||||| |
Sbjct 7249 CCTTTTAGATGTTGCAATCGGCAAGGGTACGGCCGTCTTCTAATTGTTTGCCCGCAAAGA 7308
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
| ||||| || || ||||| || || || || |||||||||||||| | ||| ||||| |
Sbjct 7309 TGAGCCTTTGCTGGTCAGGCGGGATGCCCTCCTTATCCTGAATCTTGGGTTTGACATTAT 7368
Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549
| | || ||| | ||| ||||| | || || ||||| || || || || || || |
Sbjct 7369 CAATAGTGTCGGAACTTTCAACCTCCAAGGTGATTGTCTTGCCGGTTAGAGTCTTGACGA 7428
Query 104550 ATATCTGCAT 104559
| || |||||
Sbjct 7429 AGATTTGCAT 7438
>seq19360
Length=6746
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || || || || || | || | || ||||| |||||||| || |||||||
Sbjct 5117 TTCCTCCCCTAAGTCTCAGCACCAAGTGAAGCGTGGATTCCTTCTGAATGTTGTAGTCAG 5176
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
||| |||| || ||||| | ||| || |||||||| || |||||||| ||||||||||
Sbjct 5177 CTAGGGTTCGCCCATCTTCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGAG 5236
Query 104451 GTATTCCTTCTTTATCCTGA 104470
| || ||||| || ||||||
Sbjct 5237 GAATCCCTTCCTTGTCCTGA 5256
>seq8519
Length=37620
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || || || || || || | || | || ||||| |||||||| || |||||||
Sbjct 7735 TTCCTCCCCTAAGTCTCAGCACCAAGTGAAGCGTGGATTCCTTCTGAATGTTGTAGTCAG 7676
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
||| |||| || ||||| | ||| || |||||||| || |||||||| ||||||||||
Sbjct 7675 CTAGGGTTCGCCCATCTTCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGAG 7616
Query 104451 GTATTCCTTCTTTATCCTGA 104470
| || ||||| || ||||||
Sbjct 7615 GAATCCCTTCCTTGTCCTGA 7596
>seq33807
Length=207
Score = 105 bits (116), Expect = 2e-17
Identities = 125/167 (75%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || ||||||||||| ||||| || | ||||| | ||||||||| ||||| || ||
Sbjct 204 GTGGACTCTTTCTGAATGTTATAATCCGCCAGAGTCCGACCGTCTTCCAGTTGCTTGCCT 145
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || ||||| || || || ||||| || ||||| || ||||| ||||| || ||
Sbjct 144 GCAAAGATCAGCCTTTGCTGGTCCGGAGGAATCCCTTCCTTGTCCTGTATCTTCGCCTTC 85
Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCT 104528
| ||| || | ||| || | || | || || || || || || ||||
Sbjct 84 AAATTATCAATGGTGTC-CGAGCTCTCCACTTCAAGAGTGATTGTCT 39
>seq884
Length=43986
Score = 98.7 bits (108), Expect = 2e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||| |||||||||||||| || || ||||| || | ||||||||| | ||| |||||
Sbjct 24066 CCTTCCTTATCCTGAATCTTAGCCTTGACATTATCGATGGTATCGCTCGATTCCACCTCG 24007
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || || ||||| || || || ||||| || || |||||||||||
Sbjct 24006 AGGGTGATTGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATTTT 23960
>seq16130
Length=50957
Score = 95.1 bits (104), Expect = 3e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||| |||||||||||||| || || ||||| || | ||||||||| | || |||||
Sbjct 28028 CCTTCCTTATCCTGAATCTTAGCCTTGACATTATCGATGGTATCGCTCGACTCAACCTCG 27969
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562
|| || || ||||| || || || ||||| || || |||||||||||
Sbjct 27968 AGGGTGATTGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 27922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150684433324076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |