Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_011167.1
Length=53104
Score E
Sequences producing significant alignments: (Bits) Value
seq2 2307 0.0
seq28673 390 4e-104
seq3 109 2e-19
>seq2
Length=12201
Score = 2307 bits (2558), Expect = 0.0
Identities = 1720/2006 (86%), Gaps = 16/2006 (1%)
Strand=Plus/Plus
Query 43421 TGCGATACTCCCCATTCTATAGCGAGATGGACAAGTTTTTTATGAACTTCTTGATCTAAC 43480
||||| ||||||||||| || || | |||||||| || || || |||| || ||
Sbjct 8063 TGCGAAACTCCCCATTCAATCGCTAATTGGACAAGCTTAGAGTGCGCTCCTTGCTCCAAT 8122
Query 43481 TTTGCATGTATATATCTTTTAGTATCGATATAGTCATAATTGTGTATTTCTGCAATATAA 43540
||||| || || || |||| || || |||| ||||| |||||||| |||||||
Sbjct 8123 TTTGCGTGAATGTACTTTTTGGTGTCCTTATATTCATACGCATGTATTTCACTAATATAA 8182
Query 43541 GATATGTTTAGGTGTTCTGTAATTAATTTAGACATGTATTGTGTAGTGGTTATTCCTTTT 43600
|| || |||||||| || ||||||||||||||||||||||| ||||| || |
Sbjct 8183 TCAATTCCGAGATGTTCTGTGATCAATTTAGACATGTATTGTGTAGTAGTTATATTTTGT 8242
Query 43601 TGGTATGCTGAGGATCTTATTAGTTGTCTTTGTATTTCATTTACGGGGATTTTTACGTCT 43660
||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 8243 TGGAACGCTGAAGATCTTATTAATTGTCTTTGTATTTCATTTACGGGGATTTTTACATCT 8302
Query 43661 TTCTTTTTATCGCAACGAGTTTTACGAAGTTGTTGGTTTGTTATTTTAGTAGATTTTCCG 43720
|||||||| || |||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct 8303 TTCTTTTTGTCAGAACGAGTTTTACGAGGTTGTTGATTTGTTATTGTAGTAGATTTTCTA 8362
Query 43721 GAAGGTTCAAACATAGGGTTAACATTGCTCATGATGCTCTCCCCTTTCAAAATTAACCTC 43780
||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 8363 GAAAAACTAAACATAGGGTTAACATTGCTCATGATGCTCTCCCCTTTCAAATTCAACCTC 8422
Query 43781 CTCCCTC-TCTGTTAACACAGGGTCATAGTTCCAATATGCTATCATTCCTGCTGTTTTTG 43839
||||| | ||||| | ||||| |||| |||||| |||||||| |||||||||||||||
Sbjct 8423 CTCCCCCCTCTGTATTCTCAGGGACATAATTCCAACATGCTATCGTTCCTGCTGTTTTTG 8482
Query 43840 AGAAAAGAGAGGAGGGATCTTATATTTTTGTTAGATA--GTTATTACCAATCGTTGAAAC 43897
||| || ||||| ||| | | |||||| ||| ||| | | ||| | | ||
Sbjct 8483 AGAGGAGGGAGGAAGGAG-TAAAATTTTTCTTACATAAAGCTTTTATCTA-------AAT 8534
Query 43898 CATTAATTAACTCCATAGCATTATCGACAGCTTCTTCAGAAGGTTTCTCATCTTCTCCTG 43957
| | ||| |||||||||||||| || ||||||||||||| || |||||| ||||||
Sbjct 8535 TAGCTAGTAAATCCATAGCATTATCAACGACTTCTTCAGAAGGCTTTTCATCTACTCCTG 8594
Query 43958 CATCATTCTGTATGCCATGAGTATTTATATTGATTAATAGCTTTTTAACTAATTGAAGCG 44017
|||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |
Sbjct 8595 CATCATTCTGTATGCCATGAGTATTTATATTGATTAGTAACTTCTTAACTAATTGAAGTG 8654
Query 44018 GATCTTCTTCACCAGCAACTTCAGCAAGTACCTGGTACATTTCTAATCtttttttAATCT 44077
|||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 8655 GATCTTCTTCTCCTGCAACTTCAGCAAGTACCTGGTACATTTCTAATCTCTTTTTAATTT 8714
Query 44078 GCTTATTTACGTAACCCTTTTGCCCCTTACCTTGTTCCTCTAAACGAGTTACAAAGTTGT 44137
| |||||||| || || ||||| || ||||||||||||||||| |||||||| ||||| |
Sbjct 8715 GTTTATTTACATACCCTTTTTGTCCTTTACCTTGTTCCTCTAATCGAGTTACGAAGTTAT 8774
Query 44138 AAAGGACCTTATCATTGTTAGGGTTAAGCTCAATTTGCAGCTTTTTCTTTTGTAAGTTTG 44197
| || ||||| |||||||| || || ||||||||||| ||||||||||||||||||||||
Sbjct 8775 ACAGAACCTTGTCATTGTTTGGATTTAGCTCAATTTGAAGCTTTTTCTTTTGTAAGTTTG 8834
Query 44198 TCAAAGACATCACATCCTAAATAGTAGTATCCTAATAGGTTAGCTTCTTGACCATTTTCT 44257
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 8835 TCAAAGACATCACATCCTAAATAGTAGTATCCTAATAGGTTAGCTTCTTGACCGTTTTCT 8894
Query 44258 AGAACCGCAAATGTTGGGAATTGCTCTTTTTTCTTCTCAATACGCTTTTTATGAAGAGCA 44317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8895 AGAACCGCAAATGTTGGGAATTGCTCTTTTTTCTTCTCAATACGCTTTTTATGAAGAGCA 8954
Query 44318 GCCATTCCGCCAGTCCAAACGATTTTATCGTATACAGCTAAGTTAAACTTTTGAGACACT 44377
|||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct 8955 GCCATTCCACCAGTCCAGACGATTTTATCGTATACAGCTAAGTTGAACTTTTGAGAAACT 9014
Query 44378 TCACGTAACGCTGCATCGAAATGACGTTGTAATTCTTCATCTACTTTCTCAGCTACATCT 44437
|||||||| |||||||| |||||||||||||| |||||||| || ||||||||||| |||
Sbjct 9015 TCACGTAATGCTGCATCAAAATGACGTTGTAACTCTTCATCAACCTTCTCAGCTACGTCT 9074
Query 44438 TTATGAGTGTATAAGTCGTATAGAGAGCCATTGTACTTATAGCCATTTTCAAGGATATAG 44497
|||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct 9075 TTATGAGTGTATAAATCGTATAGAGAGCCGTTGTACTTATAGCCATTCTCAAGAATATAG 9134
Query 44498 TGCATGTTAGAAACACTTAAATCAGGTGTTTCGCCAATGTTATCGCGTACAATTTGTTCA 44557
|||||||| || || ||||||||||||||||| |||||||||||||| || |||||||||
Sbjct 9135 TGCATGTTCGACACGCTTAAATCAGGTGTTTCACCAATGTTATCGCGAACGATTTGTTCA 9194
Query 44558 ATAGCCATGAATGCTTTCTCGCAACCTAATTCAGTTCCTAAACGGTCGATAACAGCATTA 44617
|||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||||
Sbjct 9195 ATAGCCATAAATGCTTTCTCACAGCCTAATTCAGTTCCTAAACGATCAATAACAGCATTA 9254
Query 44618 CCAGACATATCAGTAACATCGAATGTACCGAATCCACCATCAATGATAAGGATACGATCT 44677
|||||||||||||||||||| ||||| || || |||||||| || ||||| |||||||||
Sbjct 9255 CCAGACATATCAGTAACATCAAATGTGCCAAACCCACCATCGATAATAAGAATACGATCT 9314
Query 44678 TCTTTATTAATAATTTCtttttttACCAGGTAATATTGTGTTCCTACTGGTTGTGGGATT 44737
|||||||||||||||||||| || || | |||||| || || || || ||||| || ||
Sbjct 9315 TCTTTATTAATAATTTCTTTCTTCACTAAGTAATACTGAGTGCCGACGGGTTGCGGAATA 9374
Query 44738 ACTAAACACTCTTTTACTTTAACTGTGATTAATTCACCGTTTACTTTCACTGCTGTTTCT 44797
||||| || | ||| ||||||| ||||||||| | || |||||||| ||||||||||||
Sbjct 9375 ACTAAGCATTGTTTCACTTTAATTGTGATTAACTGGCCATTTACTTTTACTGCTGTTTCT 9434
Query 44798 TCCATAGCGACCTTACGAATTGATTCGCGTTGATTACCGAAGTGAGATACTGGAAGACCG 44857
|||||||| || || |||| ||||| ||||||||||| ||||| ||||||||||||||
Sbjct 9435 TCCATAGCTACTTTTTGAATCGATTCACGTTGATTACCAAAGTGTGATACTGGAAGACCT 9494
Query 44858 GTAACAAGTAACGGAATAGTAACGTTCTTCTTAAAGTCTTTTGCAATGAATCCGAATAGC 44917
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct 9495 GTAACAAGTAACGGAATTGTAACGTTCTTTTTAAAGTCTTTTGCAATGAATCCAAATAAT 9554
Query 44918 TGTTTCTTAAACGTTGGATCCTCATAACGTTTTGCTTTGTTCTCGCCAAGCGCGCGAATT 44977
|| |||||||| |||||||||||||| || || ||||| ||||||||||| || || |||
Sbjct 9555 TGCTTCTTAAATGTTGGATCCTCATAGCGCTTCGCTTTATTCTCGCCAAGGGCACGGATT 9614
Query 44978 AATGGAAGTTTTGATTTTCTAGCTTCTTCTCCTATGTAGTAAGGGAAGTCGGTGTTCGTT 45037
||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||
Sbjct 9615 AATGGTAGTTTGGATTTTCTAGCTTCTTCTCCTATGTAGTATGGGAAGTCAGTGTTTGTT 9674
Query 45038 AATTCAATTTTTGTGAAACTAGCTTCGTTGTAGTAGTCATCAACAGGCGCTAACACCGAT 45097
| ||||||||| |||||||||||||| ||||||||||| || ||||| || ||||| |||
Sbjct 9675 AGTTCAATTTTCGTGAAACTAGCTTCATTGTAGTAGTCGTCTACAGGAGCCAACACAGAT 9734
Query 45098 AATTCTGTAATAACATCAGCCTCTAGTGATTTGTTTTTCTTTGAAGCACGCTTTGTAAAA 45157
||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||
Sbjct 9735 AATTCTGTAATAACATCTGCCTCTAGTGATTTATTTTTCTTTGAAGCGCGTTTTGTAAAG 9794
Query 45158 CCATTTCCTAAGTCAATCGCATACGGATTTCCTAATAGCATATATATTCCCCTTTCAAAA 45217
|||||||||||||||||||| || ||||||||||||| |||||| |||||||||||| ||
Sbjct 9795 CCATTTCCTAAGTCAATCGCGTATGGATTTCCTAATAACATATACATTCCCCTTTCATAA 9854
Query 45218 CCAATGGTTAATCATTGATATTTTTGATTCTAACAGATACTTACGTTTAAATTCAATGAA 45277
||| || |||||||||| || |||||||||||||||||| ||||| | |||||| ||
Sbjct 9855 CCATTGATTAATCATTGGTA-TTTTGATTCTAACAGATATTTACGCTAGGTTTCAATAAA 9913
Query 45278 ATATACCAAAAACGCTAAATTTATTATTGGTTAATCATTGATTATTAGTTTT--CAAGGT 45335
|||| |||||||| ||| || |||| |||| ||||| || || |||| | ||||
Sbjct 9914 ATATGCCAAAAACAACAAA-ATACAATTGATTAACCATTGGTTTGTACTTTTTGCGAGGT 9972
Query 45336 TATAGGGCATCGCAAAGGCTTCGCAATATTAATAAAAATGCATGTTGCGAGGTAGGGAAG 45395
| | | |||||| |||||||| | ||| || ||||||| ||| | |||||||||||
Sbjct 9973 CGTTAGTCTTCGCAATGGCTTCGCTAAATTTAT-AAAATGCGTGTAGAAAGGTAGGGAAG 10031
Query 45396 ACATAGGCTTGTCCTCCCTAAGATTC 45421
|||| ||||||||||||||| ||||
Sbjct 10032 CCATAAGCTTGTCCTCCCTAATATTC 10057
Score = 1021 bits (1132), Expect = 0.0
Identities = 761/888 (86%), Gaps = 2/888 (0%)
Strand=Plus/Plus
Query 40936 AATAA-AAATAGCCCCGTTTTTCACGAAGCTACATCCAAAAATCATCGTAATGAACATCT 40994
||||| |||||||||||||||| ||| |||||||||||||| ||||| ||||| ||||||
Sbjct 7124 AATAATAAATAGCCCCGTTTTTAACGGAGCTACATCCAAAAGTCATCATAATGTACATCT 7183
Query 40995 TTATTTGTTATCTTTTTCAAAGCTCTCACAATCTTTTGTGCATTCTTCATTGTTGGAGAG 41054
|| || |||| || ||||| ||| | | ||||||||||||||| ||||| ||||| ||
Sbjct 7184 TTGTTAGTTAATTTCTTCAATGCTTTTATAATCTTTTGTGCATTTTTCATGGTTGGCGAA 7243
Query 41055 AATTTATCACCTTGGCATACGCGACTTATTGTAGATTTACTTACACCGCTTCTTTCTGCT 41114
|||||||| ||||||||||| ||||| || || ||||||||||| ||||||||||| |||
Sbjct 7244 AATTTATCTCCTTGGCATACACGACTAATAGTCGATTTACTTACCCCGCTTCTTTCCGCT 7303
Query 41115 AATTCTTGCTGAGTAATTTTGTTTTTCTCCAGAAAATTGGAGAGCTTTGACTTTCTCCCT 41174
||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 7304 AATTCCTGTTGAGTAATTTTGTTTTTCTCCAGAAAATTGGAGAGCTTCGATTTTCTCCCT 7363
Query 41175 TTGCCAGAAATAAGCCATCCCATTCTAATCACTCCTGTTTTAAGTTCTTAGTACAAGAGT 41234
|| ||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||
Sbjct 7364 TTACCAGAAATAAGCCATCCCATTTTA-TCACTCCTGTTTTAAATTCTTAGTACAAGAGT 7422
Query 41235 GGCCAAAGATTTCATTTTTTAAACATCCCGAAAATAGGAATCTTAATTATTATGAAAATC 41294
|| |||||||||||||||||||||||| | |||||||||| |||| | ||||||||||
Sbjct 7423 GGTCAAAGATTTCATTTTTTAAACATCTCAAAAATAGGAAATTTAAACACTATGAAAATC 7482
Query 41295 TGCGTTTCAGTAGGGATAGTTTCTTTCCAGGTTCTTCAGCATAATATTTCATGTAGTCAC 41354
| || |||| | ||||||||||| || ||||||||||||||| | |||||||||||
Sbjct 7483 TTCGCTTCAACAAAGATAGTTTCTTCCCTGGTTCTTCAGCATAAAACCGCATGTAGTCAC 7542
Query 41355 ACATTAAGATATTAATCAATTTATCAGCGGTATATCCATGCATAGGGTAGGTGTGAGCCA 41414
|||| | ||||| || ||||| ||||| ||| | || ||||||||| | | |||||||
Sbjct 7543 ACATCAGAATATTGATTAATTTTTCAGCTGTAAAACCGTGCATAGGGAAACTATGAGCCA 7602
Query 41415 TATCAGAGAAAAACACTTCAATTCTTCTCAATGTCCTTCTATCAATCTTCACTTCAACTG 41474
|||| || |||||||||||||||| ||| ||| ||| ||||||||| || || || ||
Sbjct 7603 TATCCGAAAAAAACACTTCAATTCGTCTTAATATCCGTCTATCAATTTTTACAGAAATTG 7662
Query 41475 TTCCGTACCTTTCATCATTTTCATTAAATTCTAATTCGCAATCTGTATAGTGCTTCTTAC 41534
| ||||| | || |||||||||||||| || || | |||| ||||| || ||||| |
Sbjct 7663 TACCGTATCGATCGTCATTTTCATTAAACTCCAAATTAAAATCCGTATAATGTTTCTTGC 7722
Query 41535 TCTCTAGAATTTGATACAACTGCTCCATACTATTCTTGGATCTTATATGTTCCAGAAAGT 41594
||||||| |||||||||| ||||||||||||||| || || | ||||||||| |||||||
Sbjct 7723 TCTCTAGGATTTGATACAGCTGCTCCATACTATTTTTAGAGCGTATATGTTCAAGAAAGT 7782
Query 41595 CCTCAACAAGTATCTCAGCTAAATCACTAGCGTTACACTCGTAATCTTCCTCTTCCATAT 41654
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 7783 CCTCAACAAGTATCTCAGCTAGATCACTAGCATTACACTCGTAATCTTCCTCTTCCATAT 7842
Query 41655 CCTCAATGATAATATTCATGCGGAATAAGTAAATTTTGAGCATCTTCACTTCAAAACGGT 41714
| || || ||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 7843 CTTCGATAATAATATTCATTCGAAATAAGTAAATTTTGAGCATCTTCACTTCAAAACGGT 7902
Query 41715 ATTTCTCTTTTAAAGCCCACTCAATTTTAGTCCGTTCCCACCAGTTCCCAGCACTCATTA 41774
| ||||||||||| ||| |||||||| || || |||||||| || | ||||||||| |
Sbjct 7903 ACTTCTCTTTTAACTTCCATTCAATTTTCGTTCGCTCCCACCAATTACTAGCACTCATAA 7962
Query 41775 GCTGTATTTCTTTCGTCATCACATCGTACTTACTGTACATGCTGTCAC 41822
||||||||||||||||||| || ||||| ||||| ||||||| ||||
Sbjct 7963 GCTGTATTTCTTTCGTCATAACGTCGTATTTACTATACATGCGCTCAC 8010
Score = 767 bits (850), Expect = 0.0
Identities = 489/539 (91%), Gaps = 28/539 (5%)
Strand=Plus/Plus
Query 36445 TAAGAACACTACGAGCTACTGAAAATATATCTGCTACAGGGCGTATGTGGGCGCAAGAAT 36504
|||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 3104 TAAGAACATTACGAGCGCAAGAAAATATATCTGCTACAGGACGTATGTGGGCGCAAGAAT 3163
Query 36505 TTATCCCCAATTCTTCTCGTACGCTTAAAATGGACATAGAAGACCTTCCATTCTCTGCTT 36564
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3164 TTATCCCTAATTCTTCTCGTACGCTTAAAACGGACATAGAAGACCTTCCATTCTCTGCTT 3223
Query 36565 TAGATAAAATCAACTCTGTAAACATCAAACAGTATCACTTTATAAGAGATGTTGAACGCT 36624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3224 TAGATAAAATCAACTCTGTAAACATCAAACAGTATCACTTTATAAGAGATGTTGAACGCT 3283
Query 36625 TCGAGTCAGGGGAGTCTATTACACTTCCAATTAATTACGGTATGATTGCGGAGGACACTG 36684
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 3284 TCGAGTCAGGGGAATCTATTACACTACCAATTAATTACGGTATGATTGCGGAGGACTCTG 3343
Query 36685 ACGATGTATTCACCACACCACAGAAAGACGCTATAAAACTTTATAGCTCTGTTGCAATTT 36744
|||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||
Sbjct 3344 ACGATGTATTCACCACACCACAAAAAGACGCTGTAACACTTTATAGCTCGGTTGCAATTT 3403
Query 36745 CTATTCAAGCAATACAAGAAGTTGACTTTAAAGTTGAAAATCTTCAATTTGACCACGGTA 36804
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3404 CTATTCAAGCAATACAAGAAGTTGACTTTAAAGTTAAAAATCTTCAATTTGACCACGGTA 3463
Query 36805 TGTTGAAGCAGGAAGTTGACACTCTTAAAGAACAACTTGAAGCAGAAAAACTTGAGAAGA 36864
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3464 TGTGGAAGCAGGAAGTTGACACTCTTAAAGAACAACTTGAAGCAGAAAAACTTGAGAAAG 3523
Query 36865 TTTCAATGAAAGCTGAAATTGATGAATTAAAGGTATTAGTGCAACAATTACTAAACAAAT 36924
||||||||||||||||||||||||||||||||||||||||
Sbjct 3524 TTTCAATGAAAGCTGAAATTGATGAATTAAAGGTATTAGT-------------------- 3563
Query 36925 AAACCGAAACAACAATTAATAAATGAGAAACCAGAGCAGCCATAAGCTGGTCttttttt 36983
||||||||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct 3564 --------ACAACAATTAATAAATGAGAAACCAGAGCAGCCATAAGCTGTTTTTTATTT 3614
Score = 105 bits (116), Expect = 2e-18
Identities = 303/461 (66%), Gaps = 10/461 (2%)
Strand=Plus/Plus
Query 39651 AAAAGGAGATGTTGAATAATGGAAATCAAACAAATGTTAGTGCCAAGAAGTCGATACGAT 39710
||||||||||||| |||||||||||||| | ||| ||||| ||| ||| | |
Sbjct 5186 AAAAGGAGATGTTTAATAATGGAAATCAGAAAAAATTTAGTTGATGCAAGCAAATATGGT 5245
Query 39711 GCCTTATGCCCGTATGAGATGAATCCAACAGAAATCACATTTCATAACACGTACAACGAC 39770
| ||||| ||| ||||||||| | || || | || || || || |||||
Sbjct 5246 ACTAAGTGCCCTTATACAATGAATCCAGAATTCATTACTGTCCACAATACTTATAACGAT 5305
Query 39771 GCACCGGCTATAAATGA----GCGTA-ATAATGTCGCTAACAATAGCACTGGAACATCAT 39825
|| | || | || || || || || || ||| ||| ||| | | | || |
Sbjct 5306 GCTACAGCAAATAACGAAGTGGCTTATATGAT-TCG-TAATGATAACCAAGTA---TCGT 5360
Query 39826 TTCATATCGCTGTGGATGATAAAGAAGCTATTCAGTTAATTCCTTTTAACAGAAATGCAT 39885
||||||| || || || |||||||||||| | || |||||||| | | || || |
Sbjct 5361 TTCATATTGCGGTAGACGATAAAGAAGCTGTACAAGGTATTCCTTTAGAGCGTAACGCTT 5420
Query 39886 GGCACGCTGGAGATGGTAATGGGAGAGGGAATCGTCATAGTATTGGGGTGGAAATTTGTT 39945
|||| || |||||| || | || |||||| | |||||| || ||||| ||||
Sbjct 5421 GGCATTGCGGTGATGGTGGCGGTAACGGAAATCGTAAATCTATTGGAGTTGAAATCTGTT 5480
Query 39946 ATTCACAATCAGGCGGAGCGAGATATCGCAAGGCTGAATTAAATGCAATTGAAGTAATCG 40005
| || | | || |||| ||||| || || || |||||| | || | |
Sbjct 5481 ACTCTCTAAGTGGTGGAGATCGATATTATAAAGCGGAGGATAATGCAGCTATCGTCGTAG 5540
Query 40006 CCCAATTAATGATTCAGTTTGATATTCCAATCAGTAAAGTTAAGACTCATCAAGAGAGAA 40065
| | |||| |||| |||||||||| ||||||||| || |||||| | |
Sbjct 5541 CTGGGCTCATGAAACAGTACAATATTCCAATTAGTAAAGTTCGCACACATCAATCATGGA 5600
Query 40066 ACGGGAAGTACTGTCCGCATCGAATGTTAGATGAAGGACGT 40106
|| ||||| ||||| ||||| ||||||| |||||||||
Sbjct 5601 GTGGAAAGTATTGTCCTCATCGTATGTTAGCAGAAGGACGT 5641
Score = 102 bits (112), Expect = 3e-17
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 34674 GGTCTTAAACCAAATAAAACGCTATGGCGTGATATTAGTGGTGGTAAGCCTGGTATTTTG 34733
|| |||| ||| |||| || || |||||||||||||| ||| |||||||||||||||
Sbjct 193 GGGCTTAGACCTTATAAGACACTTTGGCGTGATATTAGCAATGGAAAGCCTGGTATTTTG 252
Query 34734 AAAATATGGACAGGTGAAGCGTGGGATGTTGTCGTTCCGGATGTCGAGGAAGTTAA 34789
|||||||||||||| | ||| ||||| ||||| || ||||| || ||||||
Sbjct 253 AAAATATGGACAGGCGCAGCTTGGGAATCGGTCGTACCTGATGTTGATTCAGTTAA 308
>seq28673
Length=3150
Score = 390 bits (432), Expect = 4e-104
Identities = 538/753 (71%), Gaps = 17/753 (2%)
Strand=Plus/Plus
Query 49710 TTTAAAGGTGTTTATACGTTAAAATAAGGAGTGTGAGACCTACATAAAATACTTTTTCAC 49769
|||||| || ||| | | ||||| | |||||| | |||||| ||||||||||| |
Sbjct 1793 TTTAAAATTGCTTACAAGCGAAAATGAAAGGTGTGATAGCTACATGAAATACTTTTTAAT 1852
Query 49770 CAAGTATGTATATTCCACTAAGAGGTTTAGTGCTTTCTTTTGTGGTTCTGTGTCTAGTTT 49829
||||| |||||||| ||||| || || || |||||||||| |||||||| |||| |
Sbjct 1853 TAAGTAAGTATATTCGACTAAAAGATTGAGCGCTTTCTTTTTAGGTTCTGTATCTAAATC 1912
Query 49830 AGAAATTTGATCTAATATGACCTCGACTTGTGGTGGTATCCGGTATTCTCTGCCGACCAG 49889
|| ||||||||||| ||||| |||| ||||| || || || ||| ||||| || ||
Sbjct 1913 GGATATTTGATCTAAAATGACTTCGAACTGTGGAGGCATTCGATATGTCCTGCCAACTAG 1972
Query 49890 ATTGTCCAGACTAATGTTATATAGATCAGCAATCTTGATTAGAGTAGAAACGTCAGGTTC 49949
|| || || || | || |||| |||| || || || ||||| || || || |||||
Sbjct 1973 GTTATCGAGGCTGACATTGTATATATCACTAAGTTTAATGAGAGTTGATACATCTGGTTC 2032
Query 49950 AGATCTTCCCGCTTCCCAATTGGTATATGTTGAACGAACAACATTAAGATGGTGAGCAAC 50009
||| | ||| |||||||| || |||||||||||||| |||||||| | | ||| ||| ||
Sbjct 2033 AGACCGTCCTGCTTCCCAGTTTGTATATGTTGAACGGACAACATTCAAACGGTAAGCGAC 2092
Query 50010 ATCATTTTGAGTAAGTTTGTTTTTCTTTCGAAAGTATATAAGTCGTTCGCTAAGCAATGA 50069
||||||||| || | |||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 2093 ATCATTTTGTGTTAATTTGTTTTTCTTGCGAAAGTATACTAGTCGTTCGCTAAGCAATGA 2152
Query 50070 CTATTCACCGCCCTTTTTTATCTGTGACAATTATAAGCGAACGAGCAAAGTA--AATGGT 50127
|||||||||||||||| | |||| |||||||||||||||||||| ||| ||||||
Sbjct 2153 CTATTCACCGCCCTTTATAATCTTCGACAATTATAAGCGAACGAG--TGGTAATAATGGT 2210
Query 50128 ATATATTTGGATAAAACGATTAATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 50187
||||||| | || | |||||||||
Sbjct 2211 ATATATTCGAATGGTATGATTAATTATGTGACCTTTATGTTATGTGAAGATTCATTATGA 2270
Query 50188 NTCATGATAAAAATACTTAGAACAAAAGTTCGATTTTATGGTAATATATGCATGTGAGGT 50247
|| || ||||| |||| | |||||| ||| |||||| |||| ||| | |
Sbjct 2271 GTCTGTGTAGAAATAAAAGGAACGAGAGTTCGTATTTGTGGTAAAATATTCATACAGGTT 2330
Query 50248 CTTCAAGCG-TTCCATGCATAATTGCATATTTTATT-TTTGTATCGCTTGAGAAACCTTG 50305
| || || | |||||||||||||| ||||||| |||| | | |||| |||
Sbjct 2331 CAAAAAACGATGAAATGCATAATTGCATTTTTTATTCCATGTAATACAT--AAAACGTTG 2388
Query 50306 ATAATAAGGGATTTCTTAATTTTCTCAATAATTGTCTGATAACTGCATGACtgaaatttg 50365
||| ||| | ||| | ||||||||||||| || || || | | | ||| ||| ||||
Sbjct 2389 ATACAAAGCGGTTTTTCAATTTTCTCAATAGTTTTCAGACTATTATACGACAGAATTTTG 2448
Query 50366 ccaaaaatgtgatattatgaaaacaaataaaataaacggacgtgaaaaaaGACCCAC--- 50422
||| |||| |||||||| ||| |||||| ||||||| ||||||||| |||
Sbjct 2449 GGAAATTTGTGGTATTATGATAAC-AATAAA--AAACGGAACGAAAAAAAGACTCACAGC 2505
Query 50423 -GGTGTAAGTAGTG-CTGGTAACACTCTTACAC 50453
||||||| |||| | | |||||||||||
Sbjct 2506 GTGTGTAAG-AGTGATTTGGCCCACTCTTACAC 2537
Score = 132 bits (146), Expect = 2e-26
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 49431 TTGTTTCCTCCAGTTATGTAAAATGTAAGATTTCCGAGCCTATCATAGCAAACAATCAAT 49490
|| || ||||||||||||||||||||||||||||||||| |||||||||||||| | |||
Sbjct 1223 TTATTACCTCCAGTTATGTAAAATGTAAGATTTCCGAGCTTATCATAGCAAACATTTAAT 1282
Query 49491 TCGAATATTGTCATATTTTGTCGAA-AGAAAATAAAAAAG 49529
| |||||||||||||||||||||| ||||| |||||||
Sbjct 1283 TATAATATTGTCATATTTTGTCGAACAGAAATGAAAAAAG 1322
Score = 122 bits (134), Expect = 3e-23
Identities = 122/154 (79%), Gaps = 7/154 (5%)
Strand=Plus/Plus
Query 48662 TAAAGAAAAGACACCCAAAGGTGCCTTCCTCCGACTTGATAACCACTTTAATTTTAATAA 48721
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 173 TAAAGAAAAGACACCCTAAGGTGCCTTCCTTCGACTTGATAACCACTTTAATTTTAATAA 232
Query 48722 TATGAGTGTT----GGATTCTCATCCAATATC-ATTATATCACATTATAGAATGTTAGAA 48776
||| ||| | || || | ||||| | ||| || || ||| || |||
Sbjct 233 CGAGAGAGTTAATAGAATACT-ACCCAATTCCTATTTTACCATATTTATCTATATTA-TT 290
Query 48777 GATTGAGAAAAAAGAAAAGCACTCTTTCGAGTGC 48810
||||||||| || ||||||||||||||||||||
Sbjct 291 CATTGAGAAATAATAAAAGCACTCTTTCGAGTGC 324
>seq3
Length=4151
Score = 109 bits (120), Expect = 2e-19
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 16799 ATTAAATCAATAGCAATTATCGTAGGCGCTGCTGTGATCTTGGTGGTGTCTTGTTTGTTG 16858
|||||| ||||||||||||||||||||||| | |||||| ||| || |||||||||||||
Sbjct 2363 ATTAAACCAATAGCAATTATCGTAGGCGCTTCCGTGATC-TGGGGGCGTCTTGTTTGTTG 2421
Query 16859 TTAAGGAAAGATAAGCGAAA 16878
||||||||||||||||| ||
Sbjct 2422 TTAAGGAAAGATAAGCGCAA 2441
Score = 102 bits (112), Expect = 3e-17
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 17673 TATTCATTTCCCTGCATAAATTAGTTTTCGTTATGGATTTTTTAAAATATGATTCTTTTT 17732
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 3195 TATTCATTTCCCTGCATAAATTAGTTTTCGTTATGGATTTTTCAAAATAAGATTCTTTTT 3254
Query 17733 G 17733
|
Sbjct 3255 G 3255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 169713607062324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |