Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_018857.1
Length=158305
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 4e-14
>seq2
Length=12201
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 4173 GGTAACCGTAACTCTATCGGTGTAGAAATCTGTTACTCTATGAGTGGTGGAGAGCGTTAC 4232
|| || ||||| ||||| || || ||||||||||||||| | ||||||||||| || ||
Sbjct 5447 GGAAATCGTAAATCTATTGGAGTTGAAATCTGTTACTCTCTAAGTGGTGGAGATCGATAT 5506
Query 4233 CGTAAAGCTGAGTTGAAT---GCTATCGAGCATATCTCTGACTTAATGGTACGATTTAAT 4289
|||||| ||| ||| ||||||| | || ||| | ||| || | |||
Sbjct 5507 TATAAAGCGGAGGATAATGCAGCTATCG-TCGTA--GCTGGGCTCATGAAACAGTACAAT 5563
Query 4290 ATCCCAATCTCTAAAGTTAAGACTCACCAAGAGCGTAATGGTAAATACTGTCCTCACCGT 4349
|| ||||| ||||||| || || ||| | | ||| || || |||||||| |||
Sbjct 5564 ATTCCAATTAGTAAAGTTCGCACACATCAATCATGGAGTGGAAAGTATTGTCCTCATCGT 5623
Query 4350 ATGTTAGATGAAGGACGT 4367
||||||| |||||||||
Sbjct 5624 ATGTTAGCAGAAGGACGT 5641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506141617951800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |