Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22] 48,397 sequences; 282,201,865 total letters Query= NC_022769.1 Length=165238 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 8e-11 >seq2 Length=12201 Score = 82.4 bits (90), Expect = 8e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 23095 AATGTAAGATGAGTCGTTGTATACCCACTGATTTCCACCTAAGTTTAACCAGCCGTTTTG 23154 ||| || ||||| || || ||||||||||||| ||||| ||||||| ||| || ||| Sbjct 5905 AATATATGATGAATCATTATATACCCACTGATCGCCACCCAAGTTTAGCCAACCATTTGA 5846 Query 23155 TTTTGCCCAAACGATGTACGATTCACCGAAATTTAACTTACGGATGATAGAGTACCCAGT 23214 | |||| || ||| |||| || | ||||||||| || | | || ||||| Sbjct 5845 CTCACCCCATACTTGGTAGCATTCTCCTTTACCTAACTTACGAATAACTGCATATCCAGT 5786 Query 23215 ACCAGCACCGCTACGTAAGTTCACGTTATTACCACGGATGTAAGC 23259 |||| || | ||||| |||||||||| ||| |||||||| Sbjct 5785 TCCAGGTCCTTTTCGTAAATTCACGTTATCGCCATTAATGTAAGC 5741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 528313796495760