Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq5564 152 4e-32
seq247 147 2e-30
seq14506 136 3e-27
seq45547 132 4e-26
seq36798 122 7e-23
seq25669 109 4e-19
seq756 107 1e-18
seq9952 104 2e-17
seq19360 100 2e-16
seq8519 100 2e-16
seq33807 98.7 8e-16
seq9418 89.7 4e-13
seq6888 87.8 1e-12
seq44841 86.0 5e-12
>seq5564
Length=26244
Score = 152 bits (168), Expect = 4e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || ||||| || || ||||| || || || |||||||| || ||
Sbjct 4659 CCACCCCTGAGACGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCC 4600
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || || || || |||||| | ||||| || ||||||||||| |||
Sbjct 4599 AGGGTTCGGCCATCCTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGA 4540
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| ||| |||| ||| ||| | || | |||||||| || ||
Sbjct 4539 ATACCCTCCTTGTCTTG-AATCTTTGCTTTCACATTGTCGATCGTGTCAGAGCTCTCAAC 4481
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || || ||||| || ||||| ||||||||
Sbjct 4480 CTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 4433
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | || || ||||||||||| || || || || ||||||||||| || ||
Sbjct 4887 CCACCCCTGAGCCGAAGGACCAAATGAAGGGTTGACTCCTTCTGAATGTTATAGTCTGCC 4828
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || || || || |||||| | ||||| || ||||||||||| |||
Sbjct 4827 AAGGTTCTCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGGGGA 4768
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| |||||||| | ||| ||| ||| | || | ||||| || || ||
Sbjct 4767 ATTCCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCAATCGTGTCGGAGCTCTCAACC 4708
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || ||||||| ||| || ||||| ||||||||
Sbjct 4707 TCAAGTGTAATTGTCTTTCCAGTTAGGGTCTTCACAAAGATCTGCAT 4661
Score = 122 bits (134), Expect = 7e-23
Identities = 159/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || ||||| || |||||||||||||| || |||| |||||
Sbjct 5560 ACGAAGGACAAGGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCAGCAAGTGTGCGTCC 5501
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| || || ||| | || | || ||||| || || || |||||||||||
Sbjct 5500 ATCTTCCAGTTGCTTCCCTGCAAAGATTAGCCTCTGCTGGTCTGGTGGGATACCCTCTTT 5441
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT--ACTTCAAGAGTT 29748
|||||| | ||| ||| ||| | || | ||||| | |||||| || || || ||
Sbjct 5440 GTCTTGGATTTTAGCTTTCACATTGTCAATCGTGTCCG--AGTTCTCCACCTCCAGGGTG 5383
Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || || || ||||| ||||||||
Sbjct 5382 ATGGTTTTTCCTGTCAAAGTCTTCACAAAAATCTGCAT 5345
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | || |||||| |||||||| || || || ||||| || ||||| || || ||
Sbjct 5343 CCTCCTCGCAGACGCAGGACCAAATGGAGGGTTGACTCTTTCTGGATGTTGTAGTCTGCC 5284
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || || || ||| | ||||| || ||||||||||| |||
Sbjct 5283 AAAGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAAATCAACCTCTGCTGATCCGGGGGA 5224
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| |||||||| ||| |||| || ||| | || | || || ||| || ||
Sbjct 5223 ATACCCTCCTTGTCTTG-AATCTTTGCCTTCACATTGTCAATGGTATCTGAACTCTCGAC 5165
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || || || ||||| | || || || || || |||||
Sbjct 5164 CTCCAAAGTAATGGTCTTCCCAGTCAGTGTCTTCACGAAGATTTGCAT 5117
>seq247
Length=47399
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || | || ||| || |||||||| || || || || |||||||| ||||| |||||
Sbjct 33199 TCCACCTCGCAGACGGAGAACCAAATGGAGAGTCGACTCCTTTTGAATATTATAGTCCGC 33258
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| ||| ||| ||| || || || || || ||| |||||| |||||| |||| || ||
Sbjct 33259 AAGGGTCCGACCATCTTCCAGCTGCTTCCCTGCAAATATCAGCCTTTGCCGATCAGGAGG 33318
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
||| || || || ||||| ||||| | ||| ||| | || | ||||||||| || |
Sbjct 33319 AATCCCTTCCTTATCTTG--ATTTTGGCTTTCACATTGTCGATTGTGTCAGAACTCTCCA 33376
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
| || | ||| || || |||||||| | ||| || || ||||||||||||
Sbjct 33377 CCTCCAAAGTAATGGTCTTGCCAGTAAGGGTCTTCACGAATATCTGCATT 33426
Score = 138 bits (152), Expect = 9e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || |||| ||| | |||||||| || || |||||||| || ||
Sbjct 34364 CCACCCCTGAGACGAAGGACCAGATGCAAGGTGGATTCCTTCTGGATGTTATAGTCGGCC 34423
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || || || || |||||| | |||| ||||||||||| || ||
Sbjct 34424 AGGGTTCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAGCCTTTGCTGATCAGGTGGG 34483
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || ||||| || |||||| | ||||||| | || | | ||||| ||| ||
Sbjct 34484 ATGCCTTCCTTGTCCTG-AATTTTGGCTTTGACATTATCGATTGAATCAGAGCTTTCCAC 34542
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || |||||||| | |||||| ||||| ||||||||
Sbjct 34543 CTCAAGGGTGATTGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 34590
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || | || ||| || |||||||| || || || || ||||| || || || |||||
Sbjct 32971 TCCACCTCGCAGACGGAGAACCAAATGGAGAGTTGACTCCTTTTGGATATTGTAGTCCGC 33030
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || ||| ||| || || || || || ||| | |||| ||||||||||| |||||
Sbjct 33031 AAGAGTCCGACCATCTTCAAGCTGCTTCCCTGCAAAGATCAGCCTTTGCTGATCAGGCGG 33090
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
||| || || |||||||| ||| ||||| || ||| | || | || || || || |
Sbjct 33091 AATCCCTTCCTTGTCTTG-AATCTTTGTCTTCACATTATCAATCGTATCCGAGCTCTCCA 33149
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|||| | ||| || || || || || | ||||| || || |||||||||
Sbjct 33150 CTTCCAAAGTGATCGTCTTCCCTGTCAGAGTTTTCACGAAAATCTGCATT 33199
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||| ||| | ||||| || ||||| ||||| ||||| |||| ||| ||
Sbjct 33666 ACGAAGCACCAGATGCAAGGTGGACTCCTTTTGGATGTTGTAATCGGCAAGGGTACGGCC 33725
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || | ||||||||| ||| | || | |||||||| || ||||| || ||||| ||
Sbjct 33726 GTCTTCTAATTGTTTGCCCGCAAAGATGAGCCTTTGCTGGTCAGGCGGGATGCCCTCCTT 33785
Query 29691 GTCTTGTAATTTTTGTTTGACAGTT-TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | || | ||| || | ||||| ||| ||| || || | || |
Sbjct 33786 GTCCTG-AATCTTAGCTTTAACGTTGTCGATGGTGTCCGAACTTTCAACCTCCAAGGTGA 33844
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || | || || || |||||||||||
Sbjct 33845 TTGTCTTGCCGGTGAGAGTCTTGACGAATATCTGCAT 33881
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | || || |||| ||| | ||||||||||| || |||||||| || ||
Sbjct 33883 CCACCCCTGAGTCGAAGGACCAGATGCAATGTGGATTCTTTCTGGATGTTATAGTCAGCC 33942
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || || || || |||||| |||||| || ||||| || || ||
Sbjct 33943 AGGGTTCGGCCATCTTCAAGCTGCTTCCCAGCAAATATCAGCCTCTGCTGGTCAGGTGGG 34002
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||| ||||| || |||||| | ||| || | || | ||||| || ||| ||
Sbjct 34003 ATACCCTCCTTGTCCTG-AATTTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCAAC 34061
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || || || || || || | || || ||||| ||||||||
Sbjct 34062 CTCCAAGGTGATTGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCAT 34109
Score = 100 bits (110), Expect = 2e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || ||||| ||||| ||||||||||||||||| | || |||
Sbjct 32766 ACGAAGAACAAGGTGCAGAGTGGACTCTTTCTGAATGTTATAATCCGCCAGAGTCCGACC 32825
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || ||||| ||||| ||| | |||| |||||||| ||||| ||||| || || ||
Sbjct 32826 GTCTTCCAGTTGCTTGCCTGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATCCCTTCCTT 32885
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| |||| || || | | | || | ||||| || || ||||||||||| ||
Sbjct 32886 GTCCTGTATCTTCGCCTTCAAATTATCAATGGTGTCCGAGCTCTCCACTTCAAGAGTGAT 32945
Query 29751 AGT 29753
||
Sbjct 32946 TGT 32948
>seq14506
Length=85774
Score = 136 bits (150), Expect = 3e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || ||||| ||||| || || || || || |||||||| || || | ||| | |
Sbjct 52415 CGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCTGCCAGGGTCCTCCCA 52474
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || || |||||| | || | | ||| ||||| || ||||| |||||||||
Sbjct 52475 TCCTCGAGCTGCTTCCCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATGCCCTCTTTG 52534
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
||||||| || |||||| | || | |||||| || ||||| ||||| || ||
Sbjct 52535 TCTTGTATCTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCTACCTCAAGGGTGATT 52594
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| ||||||||||| || ||||| || |||||
Sbjct 52595 GTTTTCCCAGTTAAGGTCTTGACAAAGATTTGCAT 52629
Score = 113 bits (124), Expect = 3e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || || || || || || || ||||| ||||||| ||||| ||| || | ||
Sbjct 51971 TGCAGAGTCGACTCCTTCTGGATATTATAGTCCGCAAGAGTGCGTCCATCTTCCAACTGC 52030
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || ||| | |||||||| || || || ||||| |||||||| |||||||| ||||||
Sbjct 52031 TTCCCTGCAAAAATCAATCTCTGTTGGTCTGGCGGGATACCCTCCTTGTCTTG-AATTTT 52089
Query 29704 TGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| || || | || | ||||| || || || || | |||||| ||||| |||||
Sbjct 52090 AGCCTTCACGTTGTCAATTGTGTCCGAGCTCTCCACCTCCAAAGTTATTGTTTTCCCAGT 52149
Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786
|| || || ||||||||||||||
Sbjct 52150 CAATGTCTTCACAAATATCTGCAT 52173
>seq45547
Length=474
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || ||||||||||| |||||||| || || ||||| ||||| ||
Sbjct 212 CCACCACGCAGACGAAGGACCAAATGAAGAGTGGATTCCTTCTGTATGTTGTAATCAACA 271
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || || || ||| |||||| |||||||| ||||| ||
Sbjct 272 AGAGTCCTGCCATCTTCAAGCTGCTTCCCTGCAAATATCAGCCTTTGCTGGTCCGGAGGG 331
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
| ||||| ||||| || | ||||| || | | | || | ||||| || ||| |||
Sbjct 332 ACCCCCTCCTTGTCCTGAATTTTTTCCTTCATATTATCAAGGGTGTCGGAGCTTTCCACT 391
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| ||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct 392 TCCAGAGTGATAGTCTTTCCAGTGAAAGTCTTTACAAAGATTTGCATT 439
>seq36798
Length=236
Score = 122 bits (134), Expect = 7e-23
Identities = 161/221 (73%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 29568 CAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCG 29627
|| ||| || |||||||| || || || || ||||| || || || ||||||| || ||
Sbjct 231 CAGACGGAGAACCAAATGGAGAGTTGACTCCTTTTGGATATTGTAGTCCGCAAGAGTCCG 172
Query 29628 AGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTC 29687
| ||| || || || || || ||| | |||| ||||||||||| |||||||| || ||
Sbjct 171 ACCATCTTCAAGCTGCTTCCCTGCAAAGATCAGCCTTTGCTGATCAGGCGGAATCCCTTC 112
Query 29688 TTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAG 29746
|||||||| ||| ||||| || ||| | || | || || || || ||||| | ||
Sbjct 111 CTTGTCTTG-AATCTTTGTCTTCACATTATCAATCGTATCCGAGCTCTCCACTTCCAAAG 53
Query 29747 TTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
| || || || || || | ||||| || || |||||||||
Sbjct 52 TGATCGTCTTCCCTGTCAGAGTTTTCACGAAAATCTGCATT 12
>seq25669
Length=30460
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
||| |||| ||| || || ||||| || || || || ||||| || | |||||| |||
Sbjct 1279 CAGTACCAGATGGAGAGTAGATTCCTTCTGGATATTGTAATCGGCCAGGGTGCGGCCATC 1338
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
||||| || ||||| || | ||||||| ||||||||||| ||||| || || |||||
Sbjct 1339 CTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCCGGAGGAATTCCTTCCTTGTC 1398
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | ||| || || | || | || ||| || || || || ||||| || ||
Sbjct 1399 CTGGATCTTTGCCTTCACGTTGTCGATTGTTTCATAACTCTCAACCTCGAGAGTAATCGT 1458
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || | || || ||||| ||||||||
Sbjct 1459 CTTGCCGGTGAGCGTCTTGACAAAGATCTGCAT 1491
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
||| || | ||| || || ||||| || || || || |||||||| | ||| || |||
Sbjct 8759 CAGTACTAGATGGAGAGTTGATTCCTTCTGGATATTGTAATCCGCTAGGGTACGGCCATC 8700
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
||||| || || || || | ||||||| ||||||||||| ||||| || || |||||
Sbjct 8699 CTCGAGCTGCTTCCCCGCGAAAATCAATCGCTGCTGATCCGGAGGAATTCCTTCCTTGTC 8640
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || |||||| | || | || || ||| || || || ||||| || ||
Sbjct 8639 CTGGATCTTGGCCTTGACATTGTCGATTGTATCGGAACTCTCAACCTCGAGAGTAATCGT 8580
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| | ||||| || || ||||||||
Sbjct 8579 CTTCCCAGTCAGTGTTTTGACGAAGATCTGCAT 8547
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||| |||| || || || || || |||||||| || |||||||||| || | |
Sbjct 8989 CGCAGGACCAGGTGGAGTGTCGACTCCTTTTGAATATTGTAATCCGCAAGCGTCCTTCCA 8930
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || || || || | || | || ||||| ||||| ||||||||||| ||
Sbjct 8929 TCTTCCAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTA 8870
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || ||||| | || | || |||||| || ||||| ||||||||
Sbjct 8869 TCCTGGATCTTGGCCTTGACGTTATCGATCGTATCAGAACTCTCGACTTCCAGAGTTATC 8810
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || | || || ||||| ||||||||
Sbjct 8809 GTTTTTCCGGTGAGCGTCTTGACAAAGATCTGCAT 8775
Score = 82.4 bits (90), Expect = 6e-11
Identities = 153/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| |||||||||| |||| ||| || ||||| | || |||| ||| | ||
Sbjct 8545 CCTCCTCTCAAACGCAAGACCAGATGGAGATGCGATTCCTGCTGGATGTGGTAAGCGGCG 8486
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| || ||||| || ||||| ||| | || | || ||||||||||| ||
Sbjct 8485 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGATCCGGAGGG 8426
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| | ||| ||||| || | || |||||| | || | || || ||| || ||
Sbjct 8425 ATGCGCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTATCGGAACTCTCAACC 8366
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGC 29784
|| || || || || ||||| || | || | ||| || ||||||
Sbjct 8365 TCGAGGGTAATCGTCTTGCCGGTGAGCGTCTCAACGAACATCTGC 8321
>seq756
Length=57245
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|| || || || || || ||||| ||||||| || || ||| || | || || ||
Sbjct 50496 GTAGACTCCTTCTGGATATTATAGTCCGCAAGAGTACGTCCATCTTCCAACTGCTTCCCT 50555
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708
||| | |||||||| || || || ||||| |||||||| |||||||| |||||| | |||
Sbjct 50556 GCAAAAATCAATCTCTGTTGGTCTGGCGGGATACCCTCCTTGTCTTG-AATTTTAGCTTT 50614
Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768
|| | || | ||||| || || || || | ||||| ||||| ||||| || ||
Sbjct 50615 CACGTTGTCAATTGTGTCCGAGCTCTCCACCTCCAAGGTTATTGTTTTCCCAGTCAATGT 50674
Query 29769 TTTAACAAATATCTGCAT 29786
|| ||||||||||||||
Sbjct 50675 CTTCACAAATATCTGCAT 50692
>seq9952
Length=36685
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | | ||| ||||| | || ||||| || || ||||||||||| |||||||||
Sbjct 3231 CCTCCGCGGAGACGGAGCACAAGGTGGAGCGTCGACTCCTTTTGAATGTTGTAATCCGCA 3290
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | || || || || || || || | || | || ||||| ||||| |||
Sbjct 3291 AGCGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGGTGGA 3350
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|||||||| || || || | || ||||| | || | || |||||| || |||
Sbjct 3351 ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCAGAACTCTCGACT 3410
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| || || || || | || || ||||| ||||||||
Sbjct 3411 TCCAGAGTTATCGTCTTCCCCGTCAGAGTCTTCACAAAGATCTGCAT 3457
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
|| || | ||| || || || || || || || || || || || | ||| || |||
Sbjct 3474 AGTACTAGATGCAGAGTCGACTCCTTCTGGATATTGTAGTCGGCTAGGGTACGGCCATCC 3533
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
||||| || ||||| || | ||||||| ||||||||||| |||||||| || |||||
Sbjct 3534 TCGAGCTGCTTGCCCGCGAAAATCAATCGCTGCTGATCCGGAGGAATACCTTCCTTGTCC 3593
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || ||||| | || | |||||||| || || ||||| || || ||
Sbjct 3594 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCAGAGCTCTCGACCTCAAGGGTGATGGTC 3653
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || | ||| || || || ||||||||
Sbjct 3654 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3685
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| ||||| ||||||||||| || || || ||||| || || ||||| ||||| ||
Sbjct 3915 CCTCCTCTCAATCGCAGCACCAAGTGGAGAGTCGATTCCTTCTGGATGTTGTAATCAGCT 3974
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || || || || || || || || | || | || ||||| ||||| ||
Sbjct 3975 AGAGTACGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 4034
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || ||||| || | || ||||| | || | |||||||| || ||
Sbjct 4035 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACC 4094
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | |||||| || || ||||||||
Sbjct 4095 TCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAGATCTGCAT 4141
>seq19360
Length=6746
Score = 100 bits (110), Expect = 2e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||| | | ||||||||| |||||||||||||| || |||||||| || || ||
Sbjct 5118 TCCTCCCCTAAGTCTCAGCACCAAGTGAAGCGTGGATTCCTTCTGAATGTTGTAGTCAGC 5177
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| ||| || ||| || | ||| || |||||| | || | || |||||||| || ||
Sbjct 5178 TAGGGTTCGCCCATCTTCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGAGG 5237
Query 29679 AATACCCTCTTTGTCTTG 29696
||| || || ||||| ||
Sbjct 5238 AATCCCTTCCTTGTCCTG 5255
>seq8519
Length=37620
Score = 100 bits (110), Expect = 2e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||| | | ||||||||| |||||||||||||| || |||||||| || || ||
Sbjct 7734 TCCTCCCCTAAGTCTCAGCACCAAGTGAAGCGTGGATTCCTTCTGAATGTTGTAGTCAGC 7675
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| ||| || ||| || | ||| || |||||| | || | || |||||||| || ||
Sbjct 7674 TAGGGTTCGCCCATCTTCCAATTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGAGG 7615
Query 29679 AATACCCTCTTTGTCTTG 29696
||| || || ||||| ||
Sbjct 7614 AATCCCTTCCTTGTCCTG 7597
>seq33807
Length=207
Score = 98.7 bits (108), Expect = 8e-16
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 29587 AGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTG 29646
|| ||||| ||||| ||||||||||||||||| | || ||| || || ||||| |||
Sbjct 207 AGAGTGGACTCTTTCTGAATGTTATAATCCGCCAGAGTCCGACCGTCTTCCAGTTGCTTG 148
Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706
|| ||| | |||| |||||||| ||||| ||||| || || ||||| |||| ||
Sbjct 147 CCTGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATCCCTTCCTTGTCCTGTATCTTCGCC 88
Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | | | || | ||||| || || ||||||||||| || ||
Sbjct 87 TTCAAATTATCAATGGTGTCCGAGCTCTCCACTTCAAGAGTGATTGT 41
>seq9418
Length=21897
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||||| | ||||| | |||||||| || || || || || || ||||| ||
Sbjct 10866 CCTCCCCTCAGCCTGAGCACAAGGTGAAGCGTCGACTCCTTCTGGATATTGTAATCAGCC 10807
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | || ||||| || || ||||| | ||||| || ||||||||||| ||
Sbjct 10806 AAGGTCCTTCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGATCCGGAGGG 10747
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| ||||| || | || || || | || | |||||| || ||
Sbjct 10746 ATCCCCTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCGATCGTGTCACTGCTCTCGACC 10687
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || || || | || ||||| || ||||||||
Sbjct 10686 TCGAGAGTGATCGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 10640
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | | ||||| | ||| || || || || || ||||| || ||||| ||
Sbjct 11094 CCTCCCCTGAGCCTGAGCACAAGATGCAGGGTAGACTCCTTCTGAATATTGTAATCGGCC 11035
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || || ||||| || || || || | ||||| || ||||||||||| ||
Sbjct 11034 AAGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGG 10975
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || ||||| || | || ||||| | || | ||||| || |||
Sbjct 10974 ATCCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCGACT 10915
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || || |||||||| || || || || || ||||||||
Sbjct 10914 TCCAAAGTAATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 10868
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | | |||||| || | ||||| || || || || || ||||| || || ||
Sbjct 11778 CCTCCACGGAGACGCAGGACAAGGTGAAGGGTCGACTCCTTCTGTATGTTGTAGTCGGCC 11719
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| || || || || || || || | || | || ||||||||||| ||
Sbjct 11718 AAGGTGCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGTGGG 11659
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || |||||| | || | ||||| || ||
Sbjct 11658 ATTCCCTCTTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCGCTGCTCTCCACC 11599
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || |||||||| | ||| || ||||| || |||||
Sbjct 11598 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATTTGCAT 11552
>seq6888
Length=12617
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/204 (71%), Gaps = 3/204 (1%)
Strand=Plus/Plus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || ||||| ||||| |||||||||||||| || | || ||| || || || ||
Sbjct 6693 TGCAGAGTGGACTCTTTCTGAATGTTATAATCTGCCAGAGTCCGACCGTCTTCCAGCTGC 6752
Query 29644 TTGCCAGC-ATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702
||||| || | | |||| || ||||| ||||| ||||| || || ||| | |||| ||
Sbjct 6753 TTGCCCGCAAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCTTCCTTGCCCTGTATCTT 6812
Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| ||| | || | ||||| || || ||||||||||| || | || |||
Sbjct 6813 CGCCGTCACATTATCAATGGTGTCCGAGCTCTCCACTTCAAGAGTGATGGCCTT-CCATG 6871
Query 29763 TAAG-GTTTTAACAAATATCTGCA 29785
|||| || || ||||| |||||||
Sbjct 6872 TAAGCGTCTTCACAAAAATCTGCA 6895
>seq44841
Length=436
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/201 (71%), Gaps = 3/201 (1%)
Strand=Plus/Minus
Query 29587 AGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTG 29646
|| ||||| ||||| |||||||||||||| || | || ||| || || || || |||
Sbjct 436 AGAGTGGACTCTTTCTGAATGTTATAATCTGCCAGAGTCCGACCGTCTTCCAGCTGCTTG 377
Query 29647 CCAGC-ATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG 29705
|| || | | |||| || ||||| ||||| ||||| || || ||| | |||| ||
Sbjct 376 CCCGCAAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCTTCCTTGCCCTGTATCTTCGC 317
Query 29706 TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAA 29765
| ||| | || | ||||| || || ||||||||||| || | || ||| |||
Sbjct 316 CGTCACATTATCAATGGTGTCCGAGCTCTCCACTTCAAGAGTGATGGCCTT-CCATGTAA 258
Query 29766 G-GTTTTAACAAATATCTGCA 29785
| || || ||||| |||||||
Sbjct 257 GCGTCTTCACAAAAATCTGCA 237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 384991982908977
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |