Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_023501.1
Length=159590
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 8e-17
>seq2
Length=12201
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 4171 GGTAACCGTAACTCTATCGGTGTAGAAATCTGTTACTCTATGAGTGGTGGAGAGCGTTAC 4230
|| || ||||| ||||| || || ||||||||||||||| | ||||||||||| || ||
Sbjct 5447 GGAAATCGTAAATCTATTGGAGTTGAAATCTGTTACTCTCTAAGTGGTGGAGATCGATAT 5506
Query 4231 CGTAAAGCTGAGTTGAAT---GCTATCGAGCATATCTCTGACTTAATGGTACGATTCAAT 4287
|||||| ||| ||| ||||||| | || ||| | ||| || | ||||
Sbjct 5507 TATAAAGCGGAGGATAATGCAGCTATCG-TCGTA--GCTGGGCTCATGAAACAGTACAAT 5563
Query 4288 ATTCCAATCTCTAAAGTTAAGACTCACCAAGAGCGTAATGGTAAATACTGTCCTCACCGT 4347
|||||||| ||||||| || || ||| | | ||| || || |||||||| |||
Sbjct 5564 ATTCCAATTAGTAAAGTTCGCACACATCAATCATGGAGTGGAAAGTATTGTCCTCATCGT 5623
Query 4348 ATGTTAGATGAAGGACGT 4365
||||||| |||||||||
Sbjct 5624 ATGTTAGCAGAAGGACGT 5641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510251130346000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |