Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq45547 86.0 5e-12
>seq45547
Length=474
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||| ||||| || || || ||||| ||||| || || ||||| ||| |
Sbjct 439 AATGCAAATCTTTGTAAAGACTTTCACTGGAAAGACTATCACTCTGGAAGTGGAAAGCTC 380
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | |||| |||||||| ||||| || || || || || ||
Sbjct 379 CGACACCCTTGATAATATGAAGGAAAAAATTCAGGACAAGGAGGGGGTCCCTCCGGACCA 320
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||||||| || | ||| || || || | |||||| | ||| | | ||||||||
Sbjct 319 GCAAAGGCTGATATTTGCAGGGAAGCAGCTTGAAGATGGCAGGACTCTTGTTGATTACAA 260
Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468
|||||| || ||||| || || ||||| ||
Sbjct 259 CATACAGAAGGAATCCACTCTTCATTTGGT 230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402092290537376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |