Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22] 48,397 sequences; 282,201,865 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq45547 86.0 5e-12 >seq45547 Length=474 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| ||||| || || || ||||| ||||| || || ||||| ||| | Sbjct 439 AATGCAAATCTTTGTAAAGACTTTCACTGGAAAGACTATCACTCTGGAAGTGGAAAGCTC 380 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | |||| |||||||| ||||| || || || || || || Sbjct 379 CGACACCCTTGATAATATGAAGGAAAAAATTCAGGACAAGGAGGGGGTCCCTCCGGACCA 320 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||||| || | ||| || || || | |||||| | ||| | | |||||||| Sbjct 319 GCAAAGGCTGATATTTGCAGGGAAGCAGCTTGAAGATGGCAGGACTCTTGTTGATTACAA 260 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 |||||| || ||||| || || ||||| || Sbjct 259 CATACAGAAGGAATCCACTCTTCATTTGGT 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402092290537376