Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22] 48,397 sequences; 282,201,865 total letters Query= NC_028927.1 Length=167298 Score E Sequences producing significant alignments: (Bits) Value seq1018 86.0 7e-12 seq21751 82.4 8e-11 >seq1018 Length=28942 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 140250 ATAGGATTCGAACCTATAACCAATCGCTTAACAGGCGATCGCTCTACCATTGAGCTA 140306 ||||||||||||||||| |||||||| ||||||| |||||||||||||| ||||||| Sbjct 8918 ATAGGATTCGAACCTATGACCAATCGGTTAACAGCCGATCGCTCTACCACTGAGCTA 8862 >seq21751 Length=26781 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 140250 ATAGGATTCGAACCTATAACCAATCGCTTAACAGGCGATCGCTCTACCATTGAGCTAC 140307 ||||||||||||| ||| |||||||| ||||||| |||||||||||||| |||||||| Sbjct 16603 ATAGGATTCGAACTTATGACCAATCGGTTAACAGTCGATCGCTCTACCACTGAGCTAC 16660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534901808582960