Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22] 48,397 sequences; 282,201,865 total letters Query= NC_029006.1 Length=35703 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 1e-12 >seq1 Length=9149 Score = 86.0 bits (94), Expect = 1e-12 Identities = 117/162 (72%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 8667 GTAAAAGTACCTAATCCAGTAGTATTAGCACCATTTAGAACTTTTCCAGAAATAGAACAA 8726 || |||||||||||||| || ||||| |||| ||||| ||| ||| | |||||| Sbjct 3216 GTGAAAGTACCTAATCCGGTTTTATTAAAGCCATACAGAACATTTGTTGAAGTTGAACAA 3275 Query 8727 CCAGAATCAAAATTCATATTTAGAATGCAGAGTGGTCCAAGGGCAGCACTATTTGAAGCA 8786 |||||| || || ||||| |||||| | |||||| ||| |||||||||| Sbjct 3276 CCAGAAAGTAATTTTATATTCCGAATGCGTAAAGGTCCAGAATGTGCATTATTTGAAGCG 3335 Query 8787 GATGGTGGAGCATGGAGAAATGAAGCTA-TGATAAAAATAAA 8827 || ||||| ||||||| | ||||| | ||| || | |||| Sbjct 3336 GACGGTGGCGCATGGAAACTAGAAGCAATTGACAACATTAAA 3377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114062408997810